Vibrio antiquarius: VEA_002086
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Entry
VEA_002086 CDS
T01107
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vex
Vibrio antiquarius
Pathway
vex03420
Nucleotide excision repair
vex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VEA_002086
03430 Mismatch repair
VEA_002086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_002086
Enzymes [BR:
vex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VEA_002086
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VEA_002086
MMR (mismatch excision repair)
Other MMR factors
VEA_002086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACY50249
LinkDB
All DBs
Position
1:498502..500676
Genome browser
AA seq
724 aa
AA seq
DB search
MMDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSVEQASPFSIMS
VTFTNKAAAEMRGRIEELMMGSASGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQ
QRLLKRLIKAQNLDEKQWPARQVSWWINGKKDEGLRPSHIDAYHDPVTKTYLQLYTAYQE
ACDRAGLVDFAEILLRAHELLRDNKFVREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
DCHVMIVGDDDQSIYGWRGAKVENIEKFTLEFPSVNTIRLEQNYRSTKTILEASNTLIAN
NTERMGKELWTDGNVGEPISVYSAYNELDEARFAVNKIKEWQENGGALNDAAMLYRNNAQ
SRVLEEALIQAGLPYRIYGGMRFFERQEIRDALSYLRLMANRNDDAAFERVVNTPTRGLG
DKTLETIRRAARDRGCTMWEASLAMLDEQVLTGRAAGALSRFVELITALEDDTLEMPLHE
QTDHVIKYSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEAEEMSLLTAFLTHAA
LEAGEGQADEFEDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPSSSGRF
SQTAVKENFNETGFSLGSRVMHPKFGEGTIINFEGSGPQSRVQIAFNGEGIKWLVTAYAR
LEKL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccatctctattactcgacggtctaaacgataaacagcgtgaagccgttgca
gctcctctagaaaacttacttgtccttgctggtgcagggagtggtaagactcgcgttctt
gttcaccgtatcgcttggcttatgtcagtcgagcaagcttctcctttctcgatcatgtcg
gtcaccttcaccaataaagcggcagcagaaatgcgtggtcgtattgaagagttgatgatg
ggcagtgcatctggcatgtggaatgggactttccacggtatttgtcaccgcattttgcgt
gcacactatcttgatgccaagctaccggaagatttccaaatcatagacagcgatgatcag
cagcgcttgttaaagcgtttgatcaaagcacaaaacttggatgaaaagcagtggcctgca
cgccaagtttcatggtggattaatggtaagaaggacgaaggattacgcccatcgcatatc
gacgcttatcacgatccagtgaccaaaacttatttgcagctgtataccgcttaccaagaa
gcgtgtgatcgtgctggcttagtggactttgcggaaattttgctgcgcgcgcatgagcta
ctgcgtgacaacaagtttgtgcgtgaacactaccaagcgcgctttaagcatatcttggtt
gacgaattccaagacaccaacaacattcaatacgcttggctacgcatgatggctggccca
gattgtcacgtgatgattgttggtgacgacgaccagtcaatttatggttggcgcggtgca
aaagtcgagaacattgagaagttcacgctggagtttccgagcgtgaacaccattcgtctc
gaacaaaactatcgttcgaccaagacgattcttgaagcgtccaataccttgattgcgaac
aacactgaacgtatgggtaaagagctgtggacggatggcaatgtgggagagccgatctcg
gtttacagcgcttataacgagcttgatgaagcgcgctttgcggtcaataaaatcaaagag
tggcaagagaatggcggcgcattgaatgatgctgcgatgctgtatcgtaacaacgcgcaa
tctcgtgttttggaagaagcattaattcaggcaggcttaccgtaccgtatttacggaggc
atgcgattcttcgagcgtcaagaaatcagagatgcgttgagctacttgcgtttgatggcg
aatcgcaacgatgatgccgcgtttgaacgtgtcgtgaataccccaacacgtggtctgggc
gataagacgctagagactatccgtcgtgcagctcgtgatagagggtgcactatgtgggaa
gccagtctggcaatgctcgatgagcaagtattaacgggtcgagcagctggtgcgttaagt
cgttttgtcgaattaatcaccgcgttggaagacgatacactagaaatgccattgcatgag
caaacggaccacgtgatcaagtactcgggtttgtttgcgatgtatgagcaagagaagggc
gaaaagtctaaagctcgcatagaaaacttggaggagctggttaccgccactcgccaattc
gaaaaaccagaagaagcggaagaaatgtctctgctgacggcatttttaacgcatgcggct
ctggaagcgggcgaaggtcaggcggacgaatttgaagatgcagtccaactgatgacgctg
catagtgcgaaaggtttggaattcccattggtattcatggtcggtgtggaagaaggtatg
ttcccaagccagatgtccgctgaagaggctgggcgtttggaagaagagcgccgtctgtgt
tatgtgggtatgacgcgcgcgatgcaaaagctctacattacttacgcggaaatgcgtcgc
ctatatggccaggacaaataccacaaaccatcgcgctttattcgtgaattaccagaaacg
tgtttggatgaagtgcgcatgaaggcgcaagtgagtcgcccttcaagtagtggacgtttt
agccaaaccgcagtaaaagaaaacttcaatgagactggtttttcactaggttctcgtgtg
atgcatccgaaatttggtgaaggaacaatcatcaattttgagggcagtggcccacaaagc
cgagtgcagattgctttcaatggtgaaggcattaaatggttagtcaccgcttacgcgaga
ctggagaagctgtag
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