Vibrio antiquarius: VEA_002141
Help
Entry
VEA_002141 CDS
T01107
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vex03021
]
VEA_002141
Transcription machinery [BR:
vex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VEA_002141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
HTH_3
UCR_14kD
KORA
IF2_N
Motif
Other DBs
NCBI-ProteinID:
ACY50304
LinkDB
All DBs
Position
1:558858..559715
Genome browser
AA seq
285 aa
AA seq
DB search
MTKEAYPMALVTQDSLDSYIRSVNSYPMLTADEERELAERLHYKGEIEAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAVDS
TFDMPTDEDDSSNAYTAPMLYLEDKSSDVADNIEAANWEMHTNNRLGHALASLDERSQRI
VRSRWLDDEKATLQDLADEFGVSAERIRQLEKNAMKKLKLAVGEF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagcgtatccgatggctctagtcacgcaagatagccttgatagctatatt
cgctcagtaaacagctacccaatgctgactgcagacgaagagcgtgagctggcagaacga
ttacactacaaaggtgagattgaggctgcaaaaggtctaattctttcgcacctacgattc
gttgttcacgttgctcgtggttactctggctacggtttgccaatggcggaccttgtgcaa
gagggtaacatcggtctaatgaaagccgttaagcgttttaacccagaagtaggggttcgc
ttggtgtcttttgctgtccactggatcaaagcagagatccacgaatacgtgctacgtaac
tggcgtatcgtgaaaattgcgaccactaaagcgcaacgtaagttgttcttcaacttgcgt
aagtcgaaaaagcgcttgggttggtttaacaacggtgaagtcgaaaccgttgcgcgtgag
ttaggtgttgagccttctgaagttcgcgagatggaatcacgcttagcggcggtggattca
acctttgatatgccaactgatgaagacgacagctcaaacgcttacacagcgccgatgctg
tacctagaagacaaatcgtctgatgtggctgacaacatcgaagctgcaaactgggaaatg
cacaccaacaatcgcttgggtcatgcattagcgagtttagatgaacgtagtcagcgtatc
gtgcgttctcgttggttagatgatgagaaagcaacattgcaagacttagctgatgagttt
ggtgtgtctgccgagcgtattcgtcagctagaaaaaaacgcaatgaagaaactaaaattg
gccgtgggtgaattttaa
DBGET
integrated database retrieval system
