Vibrio antiquarius: VEA_002200
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Entry
VEA_002200 CDS
T01107
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vex
Vibrio antiquarius
Pathway
vex03030
DNA replication
vex03430
Mismatch repair
vex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VEA_002200
03430 Mismatch repair
VEA_002200
03440 Homologous recombination
VEA_002200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vex03032
]
VEA_002200
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_002200
Enzymes [BR:
vex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VEA_002200
DNA replication proteins [BR:
vex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VEA_002200
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VEA_002200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
SPT_ssu-like
Motif
Other DBs
NCBI-ProteinID:
ACY50363
LinkDB
All DBs
Position
1:complement(642924..643553)
Genome browser
AA seq
209 aa
AA seq
DB search
MNWLQRKYWHYKLKGSSYQSLFCTPDKTEYVSLDCETTSLDPNRAELVTIAATKIIDNRI
ITSQPFEVRLRAPQSLDSGSVKIHRIRHQDLVDGISEKEALLELLDFIGNRPLVGYHIRY
DKKILDLACLRQLGFPLPNPLIEVSQIYHDKLERHLPNAYFDLSLDAICKHLELPIQDKH
DALQDAISAALVFVRLTKGDLPNLTAPYT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaactggttacaacgcaaatactggcactacaaactgaaaggctcttcttatcagtcg
cttttttgcacgcccgataaaacggaatacgtttctctcgactgcgaaaccaccagcctt
gatccaaatcgcgccgagttggtgaccattgcggccacgaagatcatcgacaaccgcatc
atcactagccagccatttgaagtccgcttacgcgcgccgcaatcgctcgattctggctca
gtcaaaattcatcgaattcgccaccaagacttagtcgacgggattagcgaaaaagaggcg
ctgctcgagctgctcgactttatcggcaaccgaccacttgtcggttatcacattcgttac
gataaaaagatcttagatcttgcttgtctgaggcaacttggctttccacttcctaacccg
ctcatcgaggtcagtcagatttatcacgacaagctggaaagacatttgccgaatgcctat
ttcgacttaagtctggatgcgatttgtaaacacctcgaacttcctatccaagataaacac
gacgctttacaagatgcgatttctgccgctttggtctttgttcgcttaacgaaaggcgat
ttgcccaacctaaccgcgccgtatacataa
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