Vibrio antiquarius: VEA_002225
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Entry
VEA_002225 CDS
T01107
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vex
Vibrio antiquarius
Pathway
vex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VEA_002225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vex03019
]
VEA_002225
03110 Chaperones and folding catalysts [BR:
vex03110
]
VEA_002225
03029 Mitochondrial biogenesis [BR:
vex03029
]
VEA_002225
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vex04147
]
VEA_002225
Enzymes [BR:
vex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VEA_002225
Messenger RNA biogenesis [BR:
vex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VEA_002225
Chaperones and folding catalysts [BR:
vex03110
]
Heat shock proteins
HSP60 / Chaperonin
VEA_002225
Mitochondrial biogenesis [BR:
vex03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VEA_002225
Exosome [BR:
vex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VEA_002225
Exosomal proteins of other body fluids (saliva and urine)
VEA_002225
Exosomal proteins of breast cancer cells
VEA_002225
Exosomal proteins of colorectal cancer cells
VEA_002225
Exosomal proteins of bladder cancer cells
VEA_002225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACY50388
UniProt:
A0ABM9WRP0
LinkDB
All DBs
Position
1:672759..674405
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEQLKELSVECNDTKAIAQVGTISANSDASVGNIIAEAMERVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQESGSVDLENPFILLVDKKISNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLELEKVALEDLGQAKRVSITKENTTIIDGIGEEEMISGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALAATRAAVEEGVVAGGGVALI
RAASKIAHLTGDNEEQNVGIRVALRAMEAPIRQITKNAGEEDSVVANNVKAGEGSYGYNA
ATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKDAPAMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaatgacgcacgagttaaaatgctagagggtgta
aacgttctggctgacgcagtaaaagtaacactgggtccaaaaggacgtaatgtcgttcta
gacaaatcttttggtgcaccgactatcacgaaagatggtgtatcagtcgcgcgtgaaatt
gaactggaagataaattccagaacatgggcgcacaaatggttaaagaagttgcgtctaaa
gcaaacgacgcggcaggtgacggtacaacaacagcaacagtactagcacaatctatcgta
aacgaaggtctaaaagcagtcgcagcgggtatgaacccaatggaccttaagcgcggtatc
gacaaagcagtagcagcagcagtagagcaactaaaagagctttctgttgaatgtaacgac
acgaaagcgatcgcacaggttggtactatctctgcaaactcagacgcaagcgtaggtaac
atcattgctgaagcaatggagcgtgtgggccgtgatggcgttatcactgttgaagaaggt
caggcgctacaagatgagctagacgtagtagaaggtatgcagttcgaccgcggttaccta
tctccttacttcatcaacaaccaagagtcaggcagtgttgatctagaaaacccattcatc
ctgctagttgataagaagatctcaaacattcgtgaacttcttccaacgctagaagctgta
gcgaaagcgtctcgtccactgcttatcatcgcagaagatgtagaaggcgaagcgctagca
acattggttgtcaacaacatgcgtggcatcgtgaaagttgcagcagtgaaagcacctggc
ttcggtgaccgtcgtaaagcaatgctacaagacatcgcgatcctaactggcggtactgtg
atttctgaagaaatcggtctagagcttgaaaaagtagcactagaagatctaggtcaagcg
aagcgtgtttctatcacgaaagaaaacacgactatcatcgatggtatcggtgaagaagag
atgatctctggccgcgtagctcaaattcgtcaacaaatcgaagacgcaacttcagactac
gacaaagagaaactacaagagcgcgtagcgaaactggctggcggtgttgcagtaatcaaa
gttggtgcagcaactgaagttgaaatgaaagagaagaaagaccgtgtagaagatgcgcta
gccgcaactcgtgcagcggttgaagaaggtgttgttgctggtggtggtgttgcacttatc
cgcgcggcatctaagattgctcacctaacgggtgacaacgaagagcaaaacgttggtatc
cgcgttgcactacgtgcaatggaagcgccaatccgtcaaatcacgaagaacgcaggtgag
gaagactcagtggttgcgaacaacgtgaaagcgggtgaaggctcttacggttacaacgcg
gcaacaggcgaatacggcgacatgctagagatgggtattctagacccaacgaaagtaact
cgttctgcgctacagttcgcagcatcggttgcgggtctgatgatcacgactgaagcaatg
gttactgacctaccgcaaaaagacgcaccagcgatgcctgacatgggcggcatgggtggc
atgggcggtatgggcggcatgatgtaa
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