Vibrio antiquarius: VEA_002392
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Entry
VEA_002392 CDS
T01107
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vex03021
]
VEA_002392
Transcription machinery [BR:
vex03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VEA_002392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
COG2_N
RelB-like
WWE
Motif
Other DBs
NCBI-ProteinID:
ACY50554
LinkDB
All DBs
Position
1:864844..867753
Genome browser
AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV
IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAVVLREIFLSNQIRFNKPQDKLYAGQI
DRMDNFVLRYRALTNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
DAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAERTPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYAPVADAITSLF
SGEKLPDEAKNQITELLSEQDVEPLFRIIESEADEEAKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPARNVHLMPMDIPPQYTTSMRVAGMIGGKMSSEARAMKNLYPEEIFQEFE
GDDASWWQFDSRVNWLLEKVKEKRSEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQNRDIDIHIPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDDLIEILASGD
TSTLDEIIEASAKMNKELKSQLEQGRDRLLEMHSNGGEKAQQIVEKIESTDGDTNLVTFA
LSLFDTIGLNQDDKGENALIVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELIYAVDAQAPKRSGIARFLPKT
PIRLMMDSRGNDLSAQVEFESFNRQLSPVNRHLGSKLVTSVQKDVHRLIEAGDNLIEAKV
EEVRKQAHQDMQHSLNAELERLQALKAVNPNIRDEEIEAIDAQIKELTGYINQAQVQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttggggcagcgctggattagcgatacggaaagcgatttaggtttaggt
accgttgtagcaatggatgctcgtactgtgacattgatgtttgcagcgtcagaggaaaac
cgagtttacgcacgtaacgatgcacctgttacccgagtcacttttaacgttggtgatgtc
atcgactgccaagaaggttggtctctaaaagttgaagaagtactggaagatgaaggccta
tacacctatttcggtactcgtgaagacacgcaagaaaccgccgttgttctgcgtgagatt
tttctgagcaaccaaattcgttttaacaaacctcaagataagttgtacgccggtcaaatc
gaccgtatggacaactttgttctgcgttaccgtgcgctaaccaaccagtttgagcagcat
aagagcccaatgcgtggcctatgtggtatgcgtgcaggtttgatccctcatcagctttac
atcgcgcacgaagttggccgtcgccacgcgccacgcgtattactggcggatgaagtgggt
ttgggtaaaaccatcgaagcgggcatgatcatccaccaacaagttctgtctggtcgtgcc
gaacgcattttgattgtggtgcctgaaacactgcagcatcaatggctggttgagatgatg
cgtcgtttcaatctgcatttctctatctttgatgaagagcgctgtatcgaagcttttgcg
gatgcagaaaacccatttgatactcagcaatatgtgctgtgttctttggacttcctacgc
aagagccgcaagcgttttgaacaagcactggaaggcgaatgggacctattagttgtcgat
gaagcgcatcaccttgagtggagccaagataaaccgagccgtgaatatcaagtggtagaa
ggtttagctgaacgcactccgggcgtactgctattgacggcaacgccagaacagcttggt
cgtgagagccactttgctcgtctgcgtttgctggatcctgaccgtttctacgattacgaa
gcgttcgtcgaggaagaagaacaatacgcgcctgtagcggatgcgattacttcactcttc
tctggtgaaaaactgcctgatgaagcgaaaaaccagatcactgagttgctgtctgaacaa
gacgtagaaccacttttccgcattatcgaaagtgaagcggacgaagaagctaaagcgtca
gcgcgccaagagttgatcgacaacttgatggatcgtcacggtacgggacgtgttctgttc
cgtaacacacgtgcggctatcaaaggtttccctgcgcgtaacgtgcatctgatgccaatg
gatattccaccgcaatacaccacgtcaatgcgtgttgctgggatgatcggcggtaagatg
agttctgaagcacgtgcgatgaagaacctttacccggaagaaattttccaagaatttgaa
ggcgatgacgcaagctggtggcagtttgactcgcgcgtgaattggttacttgaaaaggta
aaggagaagcgcagcgagaaaattctggtgattgcctctcgtgcaagtacggctctgcaa
ttggagcaagcactgcgtgagcgtgaaggcattcgtgcgaccgtcttccatgaaggtatg
tcgattcttgagcgtgacaaagcagccgcttactttgcgcaagaagaaggtggtgcacag
gttcttatctgtagtgaaatcggctctgaaggccgtaacttccagtttgccaaccaatta
gtcatgtttgacttgccgttcaaccctgacttgcttgagcaacgtattggtcgtttggac
cgtatcggccaaaaccgtgacatcgacattcatattccttacctgaaaggtacctcgcaa
gccattcttgctcgctggtttgatgaaggtttaaacgcttttgcagaaacttgcccaaca
ggccgtgccgtttacgataagtattctgatgacttgattgaaatccttgcttctggtgac
accagcacgctagatgagatcattgaagcgtcagcaaaaatgaataaagagctgaaatcc
caattggagcaaggccgtgatcgcctattagaaatgcattcaaatggcggagaaaaggca
caacaaatcgttgagaaaattgaatcaaccgacggtgataccaatctggtcaccttcgca
ctttctctttttgatacgattggcttgaaccaagacgataaaggtgaaaacgcactgatt
gtgaccccatctgagcacatgatggtaccaagctacccaggtctgccatacgaaggagcg
acgatcacgtttgatcgtgatacggctttatctcgtgaagatatgcactttatcagttgg
gagcatccaatgatccaggggggtatcgatcttctgatgagtgaaggggtggggacgtct
gcggtatctctactgaaaaacaaagcgttaccagttgggaccattcttcttgagttgatt
tacgcggtagatgcgcaagcgccaaaacgcagtggtatcgcgcgcttcttaccgaaaacg
ccaatccgtttgatgatggactcgcgtggtaatgatttgtctgctcaagtggaatttgaa
agctttaaccgccagctcagccctgtaaaccgtcacttaggcagcaagttggtcacgtcg
gtacagaaagacgtacaccgcttaattgaagcgggggacaatcttatcgaagcgaaggtt
gaggaagtacgcaagcaagctcatcaagatatgcagcatagcttgaatgcagaacttgag
cgtttgcaagcactgaaagcggtaaacccaaatattcgtgatgaagaaattgaagccatt
gatgcacaaattaaggagctcactggttacatcaaccaagctcaagtgcagctcgactcg
ctacgtttgattgtggtgagccacaactaa
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