Vibrio antiquarius: VEA_002400
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Entry
VEA_002400 CDS
T01107
Name
(GenBank) hypothetical ATP-binding protein UPF0042 contains P-loop
KO
K06958
RNase adapter protein RapZ
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vex03019
]
VEA_002400
Messenger RNA biogenesis [BR:
vex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VEA_002400
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Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_18
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACY50562
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Position
1:complement(875195..876058)
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AA seq
287 aa
AA seq
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MRLIVVSGHSGAGKSIALRVLEDLGYYCVDNLPVNLLDAFVHSVADSKQNVAVSIDIRNI
PKKLKELTGTLEQLKTELDVTVLFLDANKETLLKRYSETRRIHPLSLGGTSLSLDQAIER
EKEILTPLKAHADLVLNSSGQSLHELSETVRMRVEGRDRKGLVMVFESFGFKYGLPSDAD
YVFDVRFLPNPHWEPALRPLTGLDAPIAAFLEQHQSVLSLKYQIENFIENWLPLLEKNNR
SYLTVAIGCTGGKHRSVYLTQQIGEYFANKGHQVQIRHTSLEKNTKE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgactaatcgtggttagcgggcactcaggtgccggtaagagtattgcgctgcgcgta
ctggaagacttaggttattactgtgttgataacctcccagtgaatttgctggacgcattt
gttcactctgttgctgacagcaagcagaatgttgcggtaagcattgatattcgcaatatc
cctaaaaagctaaaagaactgactggtacactggagcagttgaaaacagagcttgatgtg
accgtgcttttcttggacgccaataaggaaacgctactcaaacgctacagcgaaacacgc
cgaatccaccctttatctttaggtggcacctctctctcccttgaccaagccatcgagcgt
gagaaagaaattttaacaccacttaaagcgcatgccgatcttgtactgaacagcagcgga
caatctttgcatgagttgagtgaaaccgtgcgtatgcgtgttgaaggcagagatcgcaaa
gggcttgttatggtatttgagtcttttggcttcaaatatggcctgccttccgatgccgat
tacgtattcgacgttcgcttcttgcccaacccacattgggaaccagcgttgcgcccactt
acgggtttggatgcccctatcgccgcatttttggagcagcaccaatcggtgttaagtttg
aaataccaaattgaaaactttatagagaattggttacctctgctcgagaaaaataaccgc
agctatttgaccgttgcaataggttgtaccggaggtaaacatcgttcggtgtacttaact
cagcaaatcggtgagtacttcgccaataaaggacaccaagtgcaaattcgtcatacctca
ctagagaaaaacactaaggagtag
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