Vibrio antiquarius: VEA_002503
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Entry
VEA_002503 CDS
T01107
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase rumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vex03009
]
VEA_002503
Enzymes [BR:
vex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
VEA_002503
Ribosome biogenesis [BR:
vex03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VEA_002503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
RrnaAD
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
PCMT
Methyltransf_11
Methyltr_RsmB-F
Methyltransf_23
PrmA
Methyltransf_15
FtsJ
Methyltransf_12
Ribosomal_L22
TehB
Motif
Other DBs
NCBI-ProteinID:
ACY50665
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All DBs
Position
1:984869..986188
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AA seq
439 aa
AA seq
DB search
MARIFQPKKKTQLNTRHQAVQVERLDHHGAGIAYLKKKPLFIDGALPGEEVVTQLVEEKS
KFARGKLIKILKPSDTRVEPFCPHYHECGGCDLQHLDYDQQLTYKQQTLRQLMRKFSGND
IELDAPLLGDSLAYRRRARVSLFVDKKTRQLHFGFRKKQSKQIAQVTDCPVLAPELNVLL
PEIYSALKAFKKPEQLGHVELVLGDNGPCITLRHLSALTTVETNALTELAKRHHASLYLM
PATDQLNLVEGDMPFYQEVGVKIPFAPNNFIQVNQAVNKKMVKQAVEWLDPQKSDRVLDL
FCGVGNFSLPIAKLAKHVVGVEGVAEMVEKATNNASLNQINNAQFYHANLEQDFEGQVWA
AERFDKVLLDPARAGASGIIDQVSELGAQRVVYVSCNPATLARDSQSLMEQGYKLTKLGM
LDMFPHTSHLESMALFEKS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcatctttcaaccgaaaaagaaaacccaactcaatactcgtcatcaagcggtg
caagtggagcgtttagatcaccacggcgcaggtattgcttacctaaagaaaaaaccgctg
tttattgatggcgcattgccgggagaagaagtcgtcacacaattagtggaagaaaaaagt
aaatttgctcgcggtaaactgattaagattctcaagccgagtgacactcgcgtggagcca
ttttgtccgcattaccacgagtgtggtggctgtgatttgcaacatctagattatgaccaa
caattgacgtacaaacagcaaacactgcgtcagctgatgcgaaaattttcaggcaatgat
atcgagcttgatgcgccattattaggggattcactggcctatcgtcgtcgtgcgcgagtg
agcttatttgtcgataaaaaaacacgtcagctacattttggtttccgtaaaaagcagagt
aagcaaatcgcgcaagtgaccgactgcccagtgctggcgccggaactgaacgttctgctt
ccagagatttattcagcactaaaagcgtttaaaaagccggagcaattgggccatgtagag
ctggttcttggtgataatgggccgtgtattacgttgcgtcacttgagtgctctgacaacg
gttgaaactaacgctctaacggagctggcaaaacgtcatcatgcatcgctgtacttaatg
ccagcaacagatcagctaaaccttgttgaaggtgatatgcctttttatcaagaggttggc
gtgaaaattccttttgcgccaaataatttcattcaagtgaaccaagccgtaaacaaaaaa
atggtcaagcaagcggttgagtggttagacccgcaaaagagtgaccgagtgttagatttg
ttctgcggcgtaggcaacttcagtttaccgattgcgaagttagctaagcacgtagttggg
gtcgagggtgttgcagagatggtcgaaaaagctacaaataatgcatccttgaaccaaatc
aataatgcgcaattttatcacgctaaccttgagcaagattttgaagggcaggtctgggcg
gcagaacggtttgataaagtgctgttagacccagcacgcgcgggggcaagtgggatcatc
gatcaagtttctgagcttggcgcacagcgtgtagtttatgtttcttgtaatcctgctacc
cttgctagggacagccaaagcttgatggagcaaggctataaattaactaaattaggtatg
ctggacatgttccctcataccagtcatctagaatcgatggcattgtttgaaaagtcctaa
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