Vibrio antiquarius: VEA_002512
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Entry
VEA_002512 CDS
T01107
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vex03016
]
VEA_002512
Enzymes [BR:
vex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VEA_002512
Transfer RNA biogenesis [BR:
vex03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VEA_002512
Prokaryotic type
VEA_002512
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruD
Big_3_5
Motif
Other DBs
NCBI-ProteinID:
ACY50674
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All DBs
Position
1:994761..995804
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AA seq
347 aa
AA seq
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MSDILSSLAYLTGKPVASAKIKAQPEHFQVREDLGFAFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGETPDFSAFLAQYPSIEILATDRH
NKKLRPGDLIGNEFVVTLSEVTDVEDVEQRLEKVKQVGVPNYFGSQRFGNDGNNLEEARR
WGRENVRTRNQNKRSMYLSAARSWIFNRIVSARLESGVFDKFIDGDIAQTSSGTQLIDAS
NIADLQAQFAAGEVAITAALAGDNALPTQADALTLEQPFLDEEPDLMALIRGNRMRHDRR
DIALKPQDLAWTVEGNNITLTFSLDAGSFATSIVRELVNEVEVEREY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattttatcttcattggcttatctaacgggtaagcctgttgcatcggcaaaa
atcaaagcgcaaccagaacattttcaggttcgtgaggatttaggttttgcctttacgggc
gaaggcgagcacctaatggtgcgcattcgaaaaactggagaaaataccagttttgttgcg
aatgagttggcgaaagcttgtggcgtaaagtcgaaagacgttagctgggcaggccttaaa
gaccgccatgcggtgacggaacagtggctgagtgtccatttaccgaaaggggaaacgccg
gatttctcggcattcctagctcaatatccgagtattgagatcttagcgactgatcgacac
aacaaaaaactgcgtcctggagacttaatagggaacgagtttgttgtcactttgtctgaa
gtgactgacgttgaagatgtagagcaacgccttgaaaaagtgaaacaagttggtgtgcca
aactactttggtagtcagcgttttggcaatgatggcaacaaccttgaagaagcacgtcga
tggggacgtgaaaacgttcgtacccgtaatcaaaataagcgcagcatgtatttatcagcg
gcgcgttcgtggatcttcaaccgtatcgtttctgctcgtctagaaagtggtgtgtttgat
aaattcatcgatggtgatattgcacagacaagttctggcactcagttgattgatgcaagc
aatatcgcagatctacaagcacaatttgctgcaggtgaagtggcaattaccgcggcccta
gcaggtgataatgcgcttccaactcaagcggatgcgcttactttagaacaaccgttctta
gatgaagagcctgatctcatggcgctgattcgtggtaatcgcatgcgccacgaccgtcgc
gatattgcgctgaagccacaagatttagcttggacggttgaaggtaacaacattacgctg
actttctcactggatgcgggatcttttgcaacctctatcgttcgtgagttagttaatgag
gttgaagtagaaagagaatactaa
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