Vibrio antiquarius: VEA_002636
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Entry
VEA_002636 CDS
T01107
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_002636
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VEA_002636
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
GvpD_P-loop
Rad51
SLFN-g3_helicase
AAA
RecA
AAA_16
AAA_22
AAA_14
ABC_tran
NTPase_1
nSTAND3
zinc_ribbon_6
Zeta_toxin
AAA_24
AAA_29
Viral_helicase1
Zn_ribbon_8
DUF7125
AAA_5
Zn_ribbon_Thio2
Motif
Other DBs
NCBI-ProteinID:
ACY50798
LinkDB
All DBs
Position
1:1147824..1149203
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGSWNTITEVRIAASPTVARNERLSGYAGSATEA
TVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCSLSA
QMPTLYVTGEESLQQVAMRASRLGLPKDHLKMLSETNVDKICQIAEKEQPRIMVIDSIQV
MHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVIFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaaaacgagcgtatgtttgtaatgattgtggcgcggattttccccgttgg
caggggcagtgtaacgcatgtggttcgtggaatacgataacagaagtccgtatcgctgca
tcgccaacggttgctcgtaatgaacgtttatccggctacgctggctccgcaacagaagca
acagttcaaacgttatctgaaattgatctgcaggaagtgccacgcttcaccagtgggttt
aaagagcttgaccgcgtattaggtgggggcgttgtacccggcgccgctattttgattggt
ggtaaccctggtgcgggtaaatccaccttgctgctgcaaaccatgtgtagtttgtctgcg
caaatgccaacgctctatgtaacaggtgaagaatcgttgcagcaggtggcgatgcgtgct
tctcgactagggttgccgaaagatcatttaaaaatgctatcggaaacgaacgtcgacaaa
atttgccaaattgctgaaaaagagcaacctcgcattatggtgattgactcgattcaggta
atgcacgtttcagatgttcaatcgtcaccgggcagtgttgctcaagtacgtgaatctgcg
acagctctgacacgatacgcaaaacagaataacgtcgcggtatttattgttggtcacgta
acaaaagatggtacccttgcgggccctaaagttcttgagcacattatagactgttcagtg
ctgcttgatggtggtactgatagccgctttcgcacattgcgtagtcataaaaaccgcttt
ggcgctgtgaatgagctcggtgtttttgcaatgacaggccaagggttgaaagaagtgagt
aacccatccgcgattttcctttctcgtggtgaagaagaaacatcaggttcttctgttatg
gtggtttgggaaggtacgcgtcctctattagtagagattcaagcgttggtggattactcg
caattggcaaaccctcgccgtgttgcggtcggtttggagcagaaccgcttatcacttttg
ctcgctgtgttgcataagcatggtggcttacaaatggcagaccaagatgtctttgttaat
gtggttggcggtgttaaggtgacggagacgagtgccgatcttgcgttagttatggcgctt
ttatcgagttttcgtgaccgtccactacccaaagatgtggttatttttggtgaggtcggg
cttgcaggcgaaatccgtcctgtgccaagtgggcaagaacgtttgaatgaagcgttcaaa
catggtttcaagaaagccattgtgcctgcagccaacatgccgaaaggcggcattcctggc
atgcaaattcacggcgttaagaaattgtcggaagccatagaggcttttgacgagctgtaa
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