Vibrio antiquarius: VEA_002686
Help
Entry
VEA_002686 CDS
T01107
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vex
Vibrio antiquarius
Pathway
vex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VEA_002686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_002686
Enzymes [BR:
vex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VEA_002686
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VEA_002686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
NAT10_TcmA_helicase
AAA_11
SLFN-g3_helicase
Viral_helicase1
UvrD-helicase
AAA_22
nSTAND3
AAA_16
UvrD_C
DEAD
CbiA
AAA_28
MukB
TrwB_AAD_bind
ResIII
Herpes_Helicase
T2SSE
YrbL-PhoP_reg
AAA_7
NTPase_1
DUF87
SRP54
RNA_helicase
AAA
Motif
Other DBs
NCBI-ProteinID:
ACY50848
UniProt:
A0ABM9WTU8
LinkDB
All DBs
Position
1:1214579..1216726
Genome browser
AA seq
715 aa
AA seq
DB search
MTTNHNLHSDQDSLLVVLERLAHKGALRQLDYQFACFIDSQTNDEQPDNQALAFIAGVVS
SELGKGHICLSLFDAQGQSTDLASKLGLFGESALALNTQLQGIDWIEVLQNSSVVGAQGE
ALPLMFDGERLYLHRYWHYEVTLAEKLNQLGAAVNLQPQEFVRLSELLNHLFARQYHFLF
NALGKAVEAGSSNQVLRQQLVCDHLDVVASESLDWHAIDSVLSNARKVQDLQTLDELVPL
SACVNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQATHEKNLTIKLVAPTG
KAAARLTESIGKAVQELPVSPELKAKIPTESSTLHRLLGAIPNSAEFRHNKQNPLHLDIL
VIDEASMVDLPMMYKVVDALPKHARLILLGDKDQLASVEAGAVLGDICSFHALGYGKEQA
SAIAKLTGFDTLAHTGNSASSIADSLCMLQKSYRFDARSGIGQLAKAVNSGSAASVDNVW
ARDFSDIEHFALSSQHYNQMMQTLVQEYGRYLKRIGQQETDPKTGEPESLTHKAKAVLDT
FNQCRLLCAIREGDFGVAGLNQRIEKALAARKLIQVQDEIWYHGRPVMVTRNDHGLGLYN
GDIGICMRDDSEEEPRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKSQGSEFDYTLM
ILPPDFSPILTRELIYTGITRAKKRLALYAELNVLKRGIKVKTTRASGLVQRLTN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaatcacaatcttcattctgaccaagatagcctattggtagtgttggaacgc
ttggcgcacaaaggcgcgcttcgtcagctcgactaccaattcgcctgctttattgattct
caaactaatgatgaacagcctgacaaccaagcattggcgtttatcgcgggtgttgtcagt
agtgagcttggcaaaggacatatctgtctgtctctgttcgatgcacaagggcaatctacg
gatttagccagtaagctagggctgtttggtgagtcggcattggcgctcaacacacagttg
caaggcatagactggattgaagtattacaaaattccagcgtggtcggcgcgcaaggagaa
gccttgcctttaatgttcgatggtgagcgtctgtatctgcaccgctattggcattatgaa
gtgacactggcggaaaagctcaatcagttgggcgccgcagttaacttgcaaccacaagag
tttgtgcgattatccgagttgctcaaccatctgtttgcgcgccaataccattttctattt
aacgcgttaggcaaagcagtagaagcgggaagcagcaatcaagtgttgcgtcagcaattg
gtgtgtgaccaccttgatgtggtcgcaagcgaatcgttggattggcacgccattgattcc
gtgcttagcaatgcgcgcaaggttcaggatttgcaaacactggatgaactcgtaccactc
tcagcttgtgtgaactggcaaaaagtcgcggcggcggttgcgttaactcgtcgatttgct
gtgatttctggtggtcctggtacgggtaaaacgacgacagtaaccaaattgcttgctgct
ttgattgaacaggcgacgcacgagaaaaatctaaccatcaagctggtggccccgacgggg
aaagcggcggcgcgattaaccgagtccattggtaaagcagtgcaagaactgccagtttct
ccggagctaaaagccaaaattccgactgaatcgagcaccttgcatcgattacttggcgcg
attcctaatagcgcagaatttcgtcacaacaagcaaaatccactgcatttggatatttta
gttatcgacgaagcgtcgatggtcgatttaccgatgatgtacaaagtggtcgatgcctta
ccgaaacatgcgcggctgattttgttaggtgataaagaccaacttgcctcagttgaagca
ggggcagtgttgggtgatatctgttcgttccatgcattgggttatggcaaagagcaggcg
tcagccatcgcaaaactgacggggttcgatactttagcccatacgggtaacagtgcatct
agcattgctgatagtttatgtatgctgcaaaagagctaccgatttgacgctcgctcaggc
attggtcagttggcaaaagcggttaattccggttctgctgcgagcgtagataacgtctgg
gcgcgtgacttttctgacatcgaacatttcgcgctaagtagtcagcattacaaccaaatg
atgcagacgttggtgcaggaatacggtcgttacctcaaacgaattggacaacaggaaact
gatcctaaaaccggagagccagagtcgctaacgcacaaagccaaagcggtgttagatacc
ttcaaccaatgccgactgctgtgcgcgatccgtgaaggtgacttcggtgtggctgggcta
aaccaacgcatcgagaaagcgctcgcggcgcgcaagttaattcaggttcaggatgaaatt
tggtatcacggcagacccgtcatggttacgcgtaatgatcacggtttaggtttgtataac
ggtgatattggtatttgtatgcgagatgacagtgaagaagaaccgcgtttgaaagtcttt
ttcgagttacctgacggcagtgtgaaatcggtcttgccaagccgagtgcctgaacatgaa
acggcttacgccatgaccatccataaatcgcaaggcagtgaatttgattacaccctgatg
attttgccaccagactttagcccgatattaactcgtgagttgatttacacaggcattacc
cgcgcgaaaaagcgtttagctctttacgccgaactcaatgttctgaagcgaggtattaaa
gtgaaaaccactcgtgcgagtggattagtacagcggcttactaactaa
DBGET
integrated database retrieval system
