Vibrio antiquarius: VEA_002832
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Entry
VEA_002832 CDS
T01107
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
vex
Vibrio antiquarius
Pathway
vex02020
Two-component system
vex02040
Flagellar assembly
vex05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VEA_002832
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VEA_002832
09142 Cell motility
02040 Flagellar assembly
VEA_002832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vex03021
]
VEA_002832
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vex02035
]
VEA_002832
Transcription machinery [BR:
vex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VEA_002832
Bacterial motility proteins [BR:
vex02035
]
Flagellar system
Flagellar assembly proteins
Stator
VEA_002832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_10
GerE
MarR_2
Rv2175c_wHTH
Phage_terminase
MarR
PhyR_sigma-like
KORA
Motif
Other DBs
NCBI-ProteinID:
ACY50994
UniProt:
A0ABM9WX85
LinkDB
All DBs
Position
1:1361140..1361874
Genome browser
AA seq
244 aa
AA seq
DB search
MNKAITYDQHGKFNSQQAFIERYSVLVKRIAHHLLGRLPPSVQVEDLIQAGMIGLIEAQQ
NYDGSKGASFETYAGIRIRGAMLDDMRKGDWVPRSVHKNNREINQAIAELEGELNRDPTD
SEVATHLGMTLDQYHSALTDINCSKLVGIEDLGVSDDVISPADETDDSNPFKGVADESFR
KALVESIKQIPEREALVLSLYYDEELNLKEIGDVLGVSESRVSQILSQAMQRLRTKLSAW
TQND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcgataacctatgaccaacatggcaagtttaatagccagcaagcgtttata
gagcgctactcagtgttggttaagcgcattgctcaccacctattaggccgtttaccgccg
agtgttcaggtagaggatttaattcaggccggcatgatcggtcttatcgaagctcagcag
aattatgatggttctaaaggtgcgagctttgaaacttatgcaggtatccgtattcgtggc
gcaatgttagatgacatgcgcaaaggcgattgggtaccgcgttctgttcataaaaataat
cgagagattaaccaagcgattgcggaactggaaggcgaattaaatagagatcctactgat
tctgaagtagccacgcatctcggtatgacactggatcaatatcatagtgctctgaccgat
atcaactgctcaaaattagtcggtattgaagatttaggcgtttctgatgatgtgatttca
cctgcagatgaaactgatgacagtaacccattcaaaggggttgccgatgaatcatttcga
aaagcactggttgaatcaataaaacagattccagagcgtgaagctttggttctttcgctt
tattatgatgaagaactcaatttgaaagaaattggcgatgtgttaggcgtaagcgaatct
cgcgtaagtcaaatactgagtcaagcgatgcaacgtttgcgcaccaagctcagtgcgtgg
acacaaaatgactaa
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