Vibrio antiquarius: VEA_002989
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Entry
VEA_002989 CDS
T01107
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vex03009
]
VEA_002989
Enzymes [BR:
vex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
VEA_002989
Ribosome biogenesis [BR:
vex03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VEA_002989
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
DUF3603
Cupin_2
Orexin
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
ACY51151
UniProt:
A0ACA6QLS8
LinkDB
All DBs
Position
1:1538853..1539797
Genome browser
AA seq
314 aa
AA seq
DB search
MSEIRTKVQFVDIDEDMAGQRIDNFLRNQLKDIPKSMIYRIVRKGEVRVNKKRIKAEYKL
KAGDLVRIPPVTVEKKDDDVAPSTKLNKVAELEDMIIFEDDHMLILNKPSGTAVHGGSGL
KFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVKKFYLAL
VMGQWKSSCKVVNAPLLKNEVNSIVRVNPNGKPSETRFKILEKFEQATLIQASPITGRTH
QIRVHTQYTGHPIAWDDRYGDRRFDAYTGQVGLDRLFLHAANIKFQHPSNDEWMEINAPM
EPKLEKVLAGLRNA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaataagaacaaaagtccagttcgtcgacattgacgaagatatggcgggtcag
cgcattgataattttttgcgcaaccaattaaaagacatccctaaaagcatgatttaccga
atcgtgcgtaagggcgaagtacgtgtaaataaaaagcgtataaaagcagagtacaagtta
aaagcaggcgatctcgttcgtattccaccggtgacagtcgagaaaaaagatgacgatgtc
gcgccaagtacgaaactaaacaaagtcgcagagttggaagatatgatcatcttcgaagat
gatcatatgttgattctaaacaaaccatctggcaccgctgtgcatggtggcagtggctta
aagtttggcgcgattgaagcgcttagagctcttcgtcctcaagctcgctttcttgaactt
gtgcatcgtattgaccgtgatacttcaggtatcttattggttgctaagaagcgttctgca
cttcgtcacttgcaagcccagtttcgtgaaaagacagtgaagaagttttacttagctctt
gtcatgggacaatggaaaagcagttgtaaggttgtgaacgcgccactgcttaaaaacgaa
gtgaacagtattgttcgtgttaaccctaacggtaagccgtctgaaacgcgttttaagatt
ttggaaaagtttgaacaagcaacattgattcaagcgagtccgattactggtcgaactcac
caaatccgagttcatacacaatacacgggccacccaatcgcttgggatgatcgctacggt
gaccgccgctttgatgcttacacaggtcaagttggtttagatcgtttgttcctacacgcg
gcaaacatcaagtttcagcacccatcaaatgatgagtggatggaaatcaacgcaccgatg
gaaccgaagttagaaaaagtgttggcgggtttaagaaacgcgtaa
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