Vibrio antiquarius: VEA_003021
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Entry
VEA_003021 CDS
T01107
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vex03032
]
VEA_003021
03036 Chromosome and associated proteins [BR:
vex03036
]
VEA_003021
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_003021
DNA replication proteins [BR:
vex03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VEA_003021
Chromosome and associated proteins [BR:
vex03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
VEA_003021
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VEA_003021
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HAAS
DUF4777
HU-DNA_bdg
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
ACY51183
LinkDB
All DBs
Position
1:1572810..1573091
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AA seq
93 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEVEDAVKDILEHMASTLESGDRIEIRGFGSFSLHYREPRV
GRNPKTGDKVELEGKYVPHFKPGKELRERVNIG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtctgaactgattgaaagactctgcgctgagcaaacacacttatcagcgaaa
gaggtagaggatgctgtaaaagatattttagagcacatggcctctacgctagagagcggt
gaccgtatcgagatccgcggctttggtagtttttctcttcattaccgcgagcctcgcgta
ggtcgtaaccctaaaacgggcgataaagtggaattggaaggtaaatacgttccacatttc
aaacctggtaaagagcttcgtgagcgtgtaaatattggctaa
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