Vibrio antiquarius: VEA_003111
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Entry
VEA_003111 CDS
T01107
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vex03032
]
VEA_003111
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_003111
Enzymes [BR:
vex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VEA_003111
DNA replication proteins [BR:
vex03032
]
Prokaryotic type
DNA Topoisomerases
VEA_003111
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VEA_003111
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF6674
Motif
Other DBs
NCBI-ProteinID:
ACY51271
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Position
1:1681431..1684151
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AA seq
906 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKADIEVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIELIRKAPTPAEAKAGLIARGWDLGNVS
AMLERAGTDAARPEWLEPEYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILGEYKTL
LEEIAELMHILASTERLMEVIREELEAVRDGFGDARRTEITAASHDIDMEELIAREDVVV
TLSHGGYVKYQVLSDYESQRRGGKGKSATKMKDEDHIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEEGERITAILRVDEFSEDKFIFMATGDGTVKKTPLN
QFANVRSNGLIAVNLREDDSLIGVDITNGENEIMLFSKAGKVVRFKEAEEIPVLDENGKP
VLDENGQPEIKFKGVRPMGRTASGVRGMKLAENDQVVSLIVPSHEGDILTVTENGYGKRT
ALSEYPTKGRGTQGVVSIKVSERNGPVVGAIQVVEGDEMMMITDAGTLVRTRVGEVSQVG
RNTQGVTLIRTAEDESVVGLQRIEEVDDEELPAGEEAEALESTDENTQQDTPEAPAADDA
EEGNEE
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagctaaagagatcacgcccgtaaacattgaagatgagcttagaggttca
tatctagactatgcgatgtcagtcatcgtgggtcgtgctcttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttattcgcgatgaacgtactaggcaacgattggaac
aaaccatataaaaaatcagcccgtgttgtcggcgacgtaatcggtaaatatcacccacac
ggtgatagtgctgtgtacgacacaatcgtacgtatggctcaaccgttctcgcttcgttac
atgctggtcgatggtcaaggtaactttggctctatcgatggcgactctgctgcggcaatg
cgttacaccgaagttcgaatggcaaaaattgcccatgaactattggctgacctagacaaa
gagaccgtagactacgtaccaaactacgacggtactgagcagatcccagcggttcttcca
actaaaattccaaacctattggttaacggtgcttctggtatcgcagtaggtatggcaacc
aacatcccgcctcataaccttggcgaagtgatcgatggctgtcttgcatacatcaataat
gaagaaatcactattgatgaactaatggattacattcctggtcctgatttcccaacggcg
gcgctgatcagtggtcgtaaaggcattgtagacgcgtacaaaacaggtcgcggtaaaatc
tacatgcgttcgaaagcggacatcgaagtggagaagaatggtaaagaaaccatcatcgtc
actgagatcccgtaccaggtaaacaaagctcgcttgatcgaaaagatcgctgagctagtt
aaagataagaaagttgaaggcatcagtgcactacgcgacgagtcagataaagacggtatg
cgtattgttattgaatgtaagcgcgacgcagtgggcgaagtggttctaaacaacctatac
gctcagactcagttgcaaaccactttcggtatcaacatggtggccctaaacaatggccaa
ccacagctattcaacctgaaagatatgttgaagtgcttcgttgatcaccgtcgtgaagtt
gtgactcgtcgtactattttcgaactacgtaaagcgcgtgaacgtgcccacatccttgaa
ggtttagcgctagcgcttgccaacattgatgaaatcattgagcttatccgtaaggcgcca
acaccggctgaagcaaaagcgggccttatcgctcgtggttgggatttaggcaacgtttca
gcaatgctagagcgtgctggtacagatgctgcgcgccctgaatggctagagcctgaatac
ggtattcgtgatggtcagtacttcctgactgagcaacaagcacaagctatcctagatcta
cgtttacataaactaacaggtctagaacacgagaagattcttggcgaatacaaaacactt
ctagaagaaatcgctgaactcatgcatatccttgcgagcactgagcgtttgatggaagtg
atccgcgaagaacttgaagcggttcgtgatggttttggtgatgctcgtcgtacagaaatc
acagctgcgagccatgatatcgacatggaagagctgatcgcacgtgaagacgttgtggtt
actctatcgcacggtggttacgttaagtaccaagtactgagcgactacgagtcacagcgc
cgtggtggtaaaggtaagagtgcaaccaagatgaaagatgaagaccatatcgagcgtctt
ctagtggcgaatacccacgataacatcttgtgtttctctactcgcggtaaaacataccgt
ctgaaagtttaccaattgcctctagcgagccgcactgctcgtggtaagccaattgtgaac
atccttccactagaagaaggtgagcgcattaccgcgattctgcgtgttgatgaattctct
gaagacaaattcatcttcatggcaacaggtgacggtacggttaagaaaacgccgttgaac
caatttgcaaatgttcgttcaaatggcctgattgcggtaaacctacgtgaagacgattcg
ttaatcggtgtggatatcactaacggcgaaaacgaaatcatgctgttctctaaagcgggt
aaagtggttcgctttaaagaagcagaagaaattccagtacttgacgaaaatggtaagcca
gttcttgatgagaatggtcagccagagatcaagtttaaaggtgttcgtcctatgggtcgt
actgcctctggtgttcgtggtatgaaactggctgaaaatgaccaagttgtatcacttatc
gttccttcgcacgaaggcgacatcctaacggttacagaaaacggttatggtaaacgtaca
gcgctgagcgagtacccgacaaaaggtcgaggcactcaaggtgtcgtttctatcaaagtt
tctgagcgaaacggcccggtagttggtgctatccaggttgttgaaggtgatgaaatgatg
atgatcaccgacgctggtacactagtacgtactcgtgtgggtgaagttagccaggttggt
cgtaacacgcaaggtgtaacgcttatccgtactgcggaagacgaatctgttgttggtttg
caacgtattgaagaagttgatgacgaagagctgcctgctggtgaagaagcagaagcgtta
gagtcaacagacgaaaatacgcagcaagatactccagaagcgccagccgctgatgatgca
gaggaaggtaacgaagagtaa
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