Vibrio antiquarius: VEA_003127
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Entry
VEA_003127 CDS
T01107
Name
(GenBank) L,D-transpeptidase YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vex01002
]
VEA_003127
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vex01011
]
VEA_003127
Peptidases and inhibitors [BR:
vex01002
]
Cysteine peptidases
Family C82
VEA_003127
Peptidoglycan biosynthesis and degradation proteins [BR:
vex01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VEA_003127
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
HPPK
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ACY51287
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Position
1:1698905..1700446
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AA seq
513 aa
AA seq
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MTALMVPFFSFSTVVSLEASAQTEQEGAVQKLSVEKMIHYPEVIDQLYQSTNYRLNWENE
SDIEQFLFQVNLVALAGVTDEFENQLHRINQVRWQGDNLDFDLVMTDSLLMYLSYLEQLP
EEGINWLFANKAHVILPAPSIDTLSVLSNEITVGKLSQFLASLRSPLQTDEAFYSAYSSL
SEHAKYQYPIYEQTGLARVGDQLENKPLLIERMEVVGVDVSYLDITTQQYDEELELAVKE
FQRIHGLKEDGVIGPNTIRWINFSPQERLHLLALNSERSRIWSKDRDNVVFVNVPGYEVT
YWHDGQPLFESKVVVGRASRKTPIMSGTLDSVILNPTWNVPWTIMVKDIIPKVKRNPMYL
INHNIQIIRSWTSNEIIDPTTINWATVNPRTFPYRMRQASGLHNALGLYKFNMPNPQAIY
LHDTPSKNLFERDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKKRESTRRSNTSVPL
GERIQVHIIYQTAWLEEGTLYYRDDIYKYDHRS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacggcacttatggtgccgtttttcagcttttctaccgtcgtttctctcgaagcttct
gcacaaacagagcaagagggagcggtacaaaagctgtctgtcgaaaaaatgatccattat
ccagaggtgattgaccagctttatcaaagtactaattaccgtttgaactgggaaaatgaa
agcgatattgagcagtttctttttcaagtaaacctggttgctcttgctggcgtcacggac
gaattcgagaatcaactccatcgtataaaccaagttcgatggcagggagataacctcgac
tttgatttggtaatgacagattcactcttgatgtatctcagctatctcgagcagctccct
gaagaaggtatcaattggttatttgctaacaaagcccacgtgattttacctgctcctagc
atcgatactttgtccgtactgagtaacgaaattacggtaggcaaacttagtcaattctta
gcaagccttcgctctcctttacaaacggacgaagctttttattccgcttactcctcttta
tccgagcacgctaagtatcaatatccaatctatgaacaaacgggccttgcccgtgtcggt
gaccaattagaaaataaaccgcttctgattgagcgtatggaagtggttggtgtggatgta
tcgtatttagatatcacgacccaacagtatgatgaagaattagagttagcggtgaaagag
tttcagcgtattcatggcttgaaagaagatggggtgattggcccgaataccattcgatgg
atcaacttttctcctcaagaacgattgcatctattggcgctgaactcagaacgttcaagg
atttggtccaaagacagagataatgttgtctttgtaaatgtacctggatacgaagtgacg
tattggcacgatggtcaaccgttgttcgagtctaaagttgtggttggcagagcctcaaga
aaaacaccaatcatgtcggggactcttgactccgtcattctcaaccccacatggaatgtg
ccatggaccataatggtgaaagacatcattcctaaagtgaaacgtaatccgatgtatttg
attaaccacaacattcaaatcatccggtcttggacttcaaacgaaattattgaccctaca
accatcaattgggcgacggtgaatccgagaacatttccttatcgtatgcgacaggcatcg
ggattacacaatgcattgggattgtataagtttaatatgccaaacccccaagctatctat
ttgcatgatacgccaagtaaaaacttgttcgaacgagatagacgcgcattcagttccggg
tgtgtccgcgttgaacatgccgaccaactggcggagctcttattcaaaactcagggacta
gaagagcgcttagcgaaaaaacgggaaagtacgcgtcgctctaatacgtcggttccttta
ggagaacgcatccaagtgcacattatttatcaaaccgcatggctagaagagggaacactt
tactaccgagatgatatctataaatacgatcaccgtagttga
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