KEGG   Vibrio antiquarius: VEA_003338
Entry
VEA_003338        CDS       T01107                                 
Name
(GenBank) type III secretion inner membrane protein YscD
  KO
K03220  type III secretion protein D
Organism
vex  Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:vex00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vex02044]
    VEA_003338
Secretion system [BR:vex02044]
 Type III secretion system
  Type III secretion core apparatus
   VEA_003338
SSDB
Motif
Pfam: Yop-YscD_ppl_1st Yop-YscD_ppl_2nd Yop-YscD_cpl Yop-YscD_ppl_3rd Y4YQ_C FHA DUF4131 TPR_TNPO3_IPO13_4th
Other DBs
NCBI-ProteinID: ACY51498
LinkDB
Position
1:1900821..1902122
AA seq 433 aa
MQQWKIRILSGVHSGVEVTLPEGALVLGSDDFIADLVLSDAGVEANHFTLVCQQDSVILR
GCKEANINGENISVEDDGIELSRHAVVSVGVVKFALGYAEDALIVSNVSDESSEQDTPVV
AVQRSSWKKTTLIALLCSFVPSVIFAGMWYSQANGNNNETVTEAEPIVLVRNILGELKLS
DVRVEWNAAARQAVLEGYVEDRTQKLDLLGRIDVLGINYKSDLRTMEEIRRGVRFILRNL
GYHQVKVENGDETGTLLLTGYIDDASRWNQVEQILERDVPGLVAWKVELQRAGAYMDTLK
ALLTDAELLKKVQLVTSGDRIEVRGELDDIETTRFYGVTRDFREQYGEKPYLVLKSIPKV
SKGTNIDFPFRSVNFGQVPYVILTDNVRYMVGARTPQGYRISSVTPAGIELVKGGRVITI
ELGYEGETNNDKS
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgcagcaatggaaaattcgtattttatcaggcgtgcattccggagttgaagtcacctta
cctgagggcgctcttgtgcttggcagtgacgactttatcgcagatctcgtgctgtctgat
gctggggtcgaagctaaccatttcacgttggtttgccagcaagactcggtcattttacga
ggctgcaaagaggcaaatattaacggtgaaaacatctctgttgaagatgatgggatcgag
ttgtcacgccatgccgttgtctctgtaggcgttgtgaagttcgcactggggtacgcagaa
gatgcgttaatcgtgagtaacgtcagcgacgaatctagcgaacaggatacacctgttgtt
gctgtacaacgctctagctggaaaaaaacaacgctcatcgccttgctttgtagttttgtc
ccgagtgtcatttttgctggtatgtggtacagccaagctaacggaaacaataatgagact
gtcacagaagcagaacccattgttttggtgcgcaacatcttaggcgagctcaaacttagc
gacgttcgtgtggaatggaatgccgccgcacgccaagcggttttggaaggctatgttgaa
gatcgaactcagaaactcgatctgcttggtcgaattgatgtactaggtatcaattacaaa
agtgacttaagaacgatggaagaaatccgtcgcggggttcgatttattttgcgaaacctc
ggctatcaccaggtgaaagtcgaaaatggggatgagacgggcacactgttactgacgggt
tatatcgatgatgcaagccgctggaaccaagttgagcaaattttagagcgagacgtaccg
ggcctagtagcgtggaaggttgaactgcaaagagcgggtgcctacatggatacgctaaaa
gccttattgacggatgcagagctactgaaaaaagtccagttggttactagcggtgatcgc
atcgaagtacgcggggaacttgatgatatcgaaacgactcgattttacggtgtgactcga
gacttccgagaacaatatggtgaaaaaccatatttagttttgaaatccatacctaaggtg
agtaaaggcaccaacatcgatttcccttttcgtagcgttaactttggtcaggttccatat
gtgattctgactgataacgttcgttacatggttggtgcaagaacgcctcaaggctaccgc
atatccagtgttacgcctgctggcattgagctggtcaaaggcgggcgggtgataacaata
gaactcggatacgagggcgagacgaacaatgacaaatcttga

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