Vibrio antiquarius: VEA_003922
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Entry
VEA_003922 CDS
T01107
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vex
Vibrio antiquarius
Pathway
vex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VEA_003922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_003922
Enzymes [BR:
vex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VEA_003922
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VEA_003922
RecFOR pathway proteins
VEA_003922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_14
AAA_22
AAA_3
nSTAND3
Rad17
NTPase_1
RNA_helicase
Bac_DnaA
ABC_tran
AAA_18
AAA_2
NB-ARC
TniB
Sigma54_activ_2
AAA_24
TIP49
AAA_17
AAA_28
NPHP3_N
bpMoxR
AAA_PrkA
TsaE
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
ACY52082
LinkDB
All DBs
Position
1:complement(2556832..2557899)
Genome browser
AA seq
355 aa
AA seq
DB search
MPLAVKRAALFSQVTIFQGKKMIEADRLIAPENPAFRDEDVIDRAIRPKKLADYQGQDHV
RDQMEIFIKAAQLRSEALDHLLIFGPPGLGKTTLANIVANEMEVNIRTTSGPVLEKAGDL
AALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTL
IGATTRAGSLTSPLRDRFGITQRLEFYKIKDLQDIVQRSADCLGLSMEPEGALEVARRAR
GTPRIANRLLRRVRDYAEVKGNGHICAEVADKALNMLDVDAEGFDYMDRKLLLAIMEKFG
GGPVGLDNMAAAIGEEKDTIEDVLEPYLIQQGYLQRTPRGRIATDRAYLHFGIEK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgccacttgctgttaaacgagcggcattattctctcaggtaaccatttttcaaggtaaa
aagatgattgaagccgatcgtttaatcgctccagaaaaccctgcctttcgtgatgaagat
gtcattgatcgtgctattcgaccaaagaagttggcggattaccaaggtcaggaccacgtt
cgtgaccaaatggagatcttcatcaaagctgctcagttacgtagtgaagctcttgatcac
ctgttaatttttggccctccgggtttgggtaaaaccacgctagcaaatattgtcgccaac
gagatggaagtaaacatccgtactacttcagggccagttcttgaaaaagcaggcgattta
gccgcgttactaaccaacctagaagaaaatgacgttctatttattgacgaaattcaccgc
ttaagcccgatggttgaagaggttctgtatccggcgatggaagattatcaactggatatt
atgatcggtgaaggtccggccgctcgttctattaagatcgatttgccgccgtttactttg
attggtgcaacgacccgagcaggctctttaacgtcaccattacgcgaccgttttggtatt
actcagcgtcttgagttttataagataaaagacctccaagatattgtgcagcgcagcgcg
gattgtttaggtttgtcaatggaacctgaaggtgcattggaagtggcaagacgtgcacgt
ggcacaccacgtattgctaaccgcctactacgtcgtgttcgcgattatgcggaagtgaaa
ggaaatggtcacatttgtgcagaggttgccgacaaagcgctgaatatgcttgatgtggac
gccgaaggtttcgattatatggaccgcaaactactactcgcaattatggagaaatttggt
ggtggtccggtcggactcgataacatggcggcagcgataggtgaagaaaaggatactatc
gaagacgttcttgagccttatcttattcaacaaggttatttacaacgcactccacgtgga
agaatcgcgacagatcgtgcgtatttgcatttcggaattgaaaaataa
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