Vibrio antiquarius: VEA_004230
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Entry
VEA_004230 CDS
T01107
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vex
Vibrio antiquarius
Pathway
vex00260
Glycine, serine and threonine metabolism
vex00460
Cyanoamino acid metabolism
vex00630
Glyoxylate and dicarboxylate metabolism
vex00670
One carbon pool by folate
vex00680
Methane metabolism
vex01100
Metabolic pathways
vex01110
Biosynthesis of secondary metabolites
vex01120
Microbial metabolism in diverse environments
vex01200
Carbon metabolism
vex01230
Biosynthesis of amino acids
vex01240
Biosynthesis of cofactors
vex04981
Folate transport and metabolism
Module
vex_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VEA_004230
09102 Energy metabolism
00680 Methane metabolism
VEA_004230
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VEA_004230
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VEA_004230
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VEA_004230
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VEA_004230
Enzymes [BR:
vex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VEA_004230
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ACY52388
LinkDB
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Position
1:complement(2906853..2908103)
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEQLAIDRACKLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGEYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQARVVKNAKAMVGQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEEDAKELANWMCDVLDNIGNEEVIEATKQKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagaaactcttcgccaggaagaacacattgaacttatcgcttctgaaaactacacaagc
ccacgtgtaatggaagcgcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagcggaacaacttgctatcgac
cgtgcatgcaaactgttcggttgtgaatacgcgaacgtacagcctcactcaggttctcaa
gcaaacagcgcagtttacatggcgcttcttaacccaggcgatacagttctaggcatgagc
ctagcgcacggtggtcacctgactcacggttctccagttaacttctctggtaagcactac
aacgttatcccttacggtatcgatgaagcgggtcaaattaactacgacgagatggaacag
ctagcgcttgagcacaagcctaagatgatcatcggtggtttctctgcttactcgcaaatc
gttgattggaagcgcatgcgtgaaatcgctgacaaagtagatgcttaccttttcgttgat
atggcgcacgtagcgggtcttatcgcagcaggcgaatacccaacacctgttccacacgct
cacgtggtaacaacaacgacgcacaaaacactagcaggtcctcgcggtggtcttatcttg
tcaaatgctggcgaagatatgtacaagaaattgaactcagcagtgttccctggtggtcaa
ggtggccctctaatgcacgttatcgctggtaaagcagtagcgttcaaagaagcgatggag
ccagagttcaaagcttaccaagctcgcgtagtgaaaaacgcaaaagcaatggttggtcaa
ttccaagagcgtggctacaaaatcgtatctaacggcacagaaaaccatttgttccttgtg
gatctgatcgacaaagacatcactggtaaagacgcagacgcggcactaggtgcagcaaac
atcacagtgaacaaaaactcggtaccaaatgacccacgcagcccattcgtaacgtctggt
atccgtgtaggtacgccagcgatcactcgccgtggcttcactgaagaagatgcaaaagag
ctagcaaactggatgtgtgacgttctagataacatcggcaacgaagaagttatcgaagcg
actaaacagaaagtgctcgaaatttgtaagcgtctaccggtttacgcctaa
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