Vibrio antiquarius: VEA_004236
Help
Entry
VEA_004236 CDS
T01107
Name
(GenBank) trehalose operon transcriptional repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vex03000
]
VEA_004236
Transcription factors [BR:
vex03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VEA_004236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_4
Peripla_BP_1
SpoIIID
HTH_3
HTH_IclR
HTH_7
HGD-D
AAA_18
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ACY52394
LinkDB
All DBs
Position
1:complement(2915173..2916120)
Genome browser
AA seq
315 aa
AA seq
DB search
MSKKLTILDIAKLAGVGKSTVSRVLTNDPKVKPQTREKVEQIIRESGYVPSKSAQSMRGG
SQKVIGVIISRLDSPSENRAVGTMLNALYSAGYDAVIMESQFDRDKTNEHLSVLKRRNVD
GVIVFGFTGCDEQALAEWGNRIVVIAMDTDNVSSINYDNQGVIDMALSHLEQQSLSRIAY
IGVDPEDKTTGLARLNAYKAWCQRKQLTPCFQTGKLSHESAYQLVDHVLKADTQAIVCAS
DTIALGVIKRLQELGREDVVVTGVGGNELLSFLFPKVFSVDPGYTLAGEKSAKMLINQLN
GDEEVVHFTQQPICR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaactcactattcttgatatcgcgaaattggcaggcgttggcaaatcaaca
gtaagccgtgtgcttaccaacgatccaaaagtgaaacctcaaacgcgagagaaagtagag
caaatcattcgtgaatctggttatgtaccgtccaaatctgcgcaatcaatgcgtggcggt
agccaaaaagtcattggtgttatcatctcccgtctagactcaccatccgaaaatcgtgct
gttggtacaatgctcaatgcattgtattccgctggttatgatgcggtgatcatggagagt
cagtttgaccgagacaaaaccaatgagcacttgagtgtgcttaagcgtcgcaatgtggat
ggcgtgattgtatttgggtttactggatgcgatgagcaagccttagccgagtggggcaat
cgcattgtggtgattgcgatggataccgataacgtctcttccatcaattatgataaccaa
ggcgtgatagacatggctttgtctcaccttgagcagcaatctttatctcgcattgcttat
attggtgttgatcccgaagataaaaccacaggcttggctcgtttaaatgcttacaaagct
tggtgtcagcgcaagcaacttacgccttgcttccaaaccggtaagcttagccatgaaagt
gcttatcagttggtggaccacgttctgaaagcagacacgcaagctattgtgtgtgccagc
gataccattgcattgggcgtaatcaagcgtcttcaagagttaggtcgtgaagacgtggtc
gtgacaggcgtgggtggtaacgagttgctttctttccttttccctaaagtatttagtgtc
gatcctggttatacccttgcgggtgaaaagtccgctaaaatgctgattaatcaattaaat
ggcgatgaagaagtcgttcacttcactcaacaacctatttgccgctaa
DBGET
integrated database retrieval system
