Vibrio antiquarius: VEA_004445
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Entry
VEA_004445 CDS
T01107
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
vex
Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vex03009
]
VEA_004445
Enzymes [BR:
vex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VEA_004445
Ribosome biogenesis [BR:
vex03009
]
Prokaryotic type
rRNA helicases
VEA_004445
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_C_2
AAA_11
UvrD-helicase
UMPH-1
AAA_30
Utp25_C
AtuA_ferredoxin
AAA_22
Myb_DNA-binding
Motif
Other DBs
NCBI-ProteinID:
ACY52603
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Position
1:3155165..3156388
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AA seq
407 aa
AA seq
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MIRTFAELDLDQNLLEAIEEMGYKRPTKIQAEAIPQALDGRDILASAPTGTGKTAAFVLP
ALQYLQDFPRRKPGPARILILTPTRELAMQIADQARALAKNTKLNIFTITGGVQYQEHAD
ILATTQDIVVATPGRLKEYIDAERFDCRAIEWLILDEADRMLDMGFAPTVDRLSNECRWR
KQTLLFSATLEGKGVEGFTADLLNDPAEIDAKSPLRERKKIAQWYHRADDAEHKLELLKH
IITQQAERTIVFLKTRERLAELRAQLESAQIPCSWIQGEMPQDRRNNAISRFRDGTVNVL
LATDVAARGIDLPDVSHVINYDMPRTADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDR
VARYVKEDIKERFVKEMRPKHKKPVFKKKKKKEDKKKPAKKKTAKKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagaacctttgctgaacttgatctagaccaaaacctacttgaagccattgaagag
atgggttacaaacgcccaacaaaaattcaggcagaagcgattccacaagcgttggatggt
cgtgacattttagcgtcagcgccaacaggtactggtaaaacggcagccttcgtcctgcct
gcattgcaatacttgcaagacttccctcgtcgcaagcctggacctgcgcgtattttgatc
ctaacgccgacgcgcgaattggcgatgcaaatcgccgatcaagcacgagctttggcaaaa
aacactaaactgaacattttcaccatcacaggtggtgttcaataccaagagcacgccgat
atccttgcgacaacacaagacattgtggttgcaacgcctggccgtttaaaagaatacatt
gatgcagagcgttttgattgccgtgcgattgaatggttaattctggatgaagcagaccgt
atgctagacatgggttttgctcctactgttgatcgtctatctaacgagtgccgctggcgt
aaacaaacccttctattctcagcaacactagagggtaaaggcgtagaaggctttaccgct
gatctgttgaatgacccagcagaaattgatgcaaaatcgccactgcgtgaacgtaagaag
attgctcagtggtaccaccgtgctgatgatgcagaacacaagcttgaattactaaaacac
attattactcagcaagcagaacgcaccattgtcttcttgaagacacgtgagcgtttggca
gagctacgagcgcagcttgagagcgcacagattccatgttcttggattcaaggtgaaatg
cctcaagatcgtcgtaacaatgcgatttctcgcttccgcgatggtactgtgaacgtgctg
ctcgcgacggacgttgctgcgcgtggtatcgaccttccggatgtgtcacacgttattaac
tacgacatgccacgtacggctgatgtctaccttcaccgtattggccgtacggctcgtgcg
ggtaagaaaggtaacgctatctcaatcgtagaagcacacgaccaaccaatgatggatcgc
gttgcacgttacgtgaaagaagacatcaaagagcgtttcgtgaaagagatgcgtccgaaa
cacaaaaaacctgtgtttaagaagaaaaagaaaaaagaagacaagaagaagccagcgaaa
aagaaaaccgctaagaagaagtaa
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