Vescimonas fastidiosa: MM35RIKEN_04120
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Entry
MM35RIKEN_04120 CDS
T07633
Symbol
truA1
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vfa
Vescimonas fastidiosa
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfa03016
]
MM35RIKEN_04120 (truA1)
Enzymes [BR:
vfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MM35RIKEN_04120 (truA1)
Transfer RNA biogenesis [BR:
vfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MM35RIKEN_04120 (truA1)
Prokaryotic type
MM35RIKEN_04120 (truA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BCK78220
UniProt:
A0A810PQB2
LinkDB
All DBs
Position
413488..414255
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AA seq
255 aa
AA seq
DB search
MRNIALVLMYNGTAYHGWQVQKTEISVAETLERGLSMVCGEKIKCVGCGRTDAGVHAEYY
VANFHTNSRIPVERIPFAVNTHIPEDIVVRRAFEVAEDFNAIGSCIKKEYTYRIYNSRIK
NPFYVHRAYFYPKRLDETLMDRAARMFEGTHDFAAVRSVGTNVKSTVRTIYYCRVERRGE
LLELKVCANGFLYNMVRAITGTVLYAAEGKLLPEDIPAILDSGNRTLAGPTAPPGGLYLT
RVWYEDERLNGTDEI
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacatagcccttgtgctcatgtataacggcacggcctatcacggctggcaggtg
cagaaaaccgagatttccgtggcggagaccctggagcggggcctttccatggtgtgcggt
gagaagatcaagtgcgtgggctgcggccgcaccgatgccggcgtacacgcggaatactat
gtggccaatttccataccaattcccgcattcccgtagagcgcatcccctttgcggtgaac
acgcatattcccgaggacattgtagtgcgtcgagcctttgaggtggcggaggattttaac
gccatcggctcctgcataaaaaaagagtatacctaccgtatttataattcccgcatcaaa
aacccgttttatgtccatcgggcctatttctatcccaagaggctggacgagacgctcatg
gatcgggcggcgcggatgtttgaggggacccatgactttgctgcggtgcggtctgtgggg
accaatgtgaaaagcacggtacgcaccatttattattgccgcgtggagcgccggggcgag
ctgctggagctgaaggtgtgcgccaacggattcctatataatatggtgcgggccatcacg
ggcacggtgctgtacgccgccgaggggaagctgctgccggaggacattccggcgattctg
gactcgggcaaccgcaccttggccggccccacggcgccgccgggaggactgtatctgacc
cgggtgtggtatgaggatgaaagactgaatggaacagatgaaatttga
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