Vescimonas fastidiosa: MM35RIKEN_04480
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Entry
MM35RIKEN_04480 CDS
T07633
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
vfa
Vescimonas fastidiosa
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfa03400
]
MM35RIKEN_04480 (addA)
Enzymes [BR:
vfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MM35RIKEN_04480 (addA)
DNA repair and recombination proteins [BR:
vfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MM35RIKEN_04480 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_16
AAA_12
AAA_22
DEAD
DnaB_C
DAM-like-phage1
Motif
Other DBs
NCBI-ProteinID:
BCK78256
UniProt:
A0A810PX29
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All DBs
Position
460643..464191
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AA seq
1182 aa
AA seq
DB search
MGEIRLTDEQRMAVTDRGGSLLVSAAAGSGKTKVLVERLFRRIEEEQCSVDDFLIITYTR
AAAAELRGKIANELSKRVAEQPESDHLRRQLFRVYQAEIKTVDAFCGSLLRQNIHLLTPV
KGRSLTPDYRLLDEQEGAVLRQRVLDRVMDRFYEALEQGDGNAELLAQTLGAGRDDSRLT
ELVLELYDKLQSQAHPLAWLRETRKFWQAVPEHLEQTPFGEILLNDLKQWSNFWNGRLQR
AVEEMAACPAVETAYGAGFLAMSRTMEALREATDRGWDAVAAVDLAFPRLKPVRGQENEY
WKTRMQKLKERFQKELKEVMEPFAVTQAEHLEDLRAMAPAMLALVDLTADFTESFQQEKV
RRNVADFSDQERYAVELLTDAAGAPTELAKQISREYVEIMVDEYQDTNQVQNCIFDAISR
KGENLFTVGDVKQSIYRFRLAQPEIFLEKYESYRHASAALPGQARKILLTCNFRSRPEVL
EATNFIFRNILSREMGEMEYGEAEKLNAGATYYAPAPDRETELHLVSVEDTEDEEFDRVR
VEADFVAGRIRKLLEEKFPVQGEDGTLRPVQPEDIVILMRSPGSRMAELGAALSRCGIPY
SGGEREAFFETVEISTVYSLLQIIDNPRQDVPLIAVLRSPLYGFTPDLLSRIRSCAKGDF
YEACCACGEEPVQAFLQQLSQLRDLAAELPADQLLWQMYDRLHIPGIFGAMENGELRRSR
LLNLCRYAEDLAGMGKITVFELTDYLRSLMARGKEPQIASEQSTGGVRIMSIHRSKGLEF
PVVILCDLNRKFNKDDMKRPVLVHSRLGLGAERVDPARRVRYSTVSKTALALEMEKEMLS
EEMRLLYVAMTRAQEKLILVDCMKKARSQVESLAALTDLPVPPQVVRGAANMGQWVLQTL
LCTTQAGVLHTWAGVQPELRQDAPGWRVYLHENPKNTSCAEEEKKQKEPEPPLFPELLEQ
RYGHMDASRVPSKVTATQLKGREVDQQIAEGTGQHMAPRSDFPAPKFLQQRQGLTPAERG
TATHLVMQYLPFDTPARADAVEEFVRGLVERRLLTPEQGASVNTLQIAKFLASDLCAQMR
SAEQVWREFRFALLVPAEVYDPRVRGEEMMLQGVADVCFRTEKGIAVADFKTDYLHPGEE
KARAERYRAQLEAYSLALSRVLEAPVCRRILYFFSTGAEVEI
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagatcagactgacggacgagcagcggatggctgtgacggaccggggcgggagt
ctgctggtgtcggcggcggccggctccggcaagaccaaggtgctggtggagcggctgttt
cgcaggatcgaggaggagcagtgcagtgtggacgacttcctcattatcacctatacccgg
gccgccgccgcagagcttcggggaaagattgcaaacgagctttccaaacgggtggcggag
cagcctgagagcgaccatctgcgccgccagctttttcgggtatatcaggcggaaatcaaa
acggtggacgccttttgcgggagcctgttgcggcaaaacatacatctgcttacacctgta
aaggggagaagccttacacctgattaccggcttttggacgagcaggagggggccgtgctg
cgccagcgggtgctggaccgggtgatggaccgcttctatgaggctctggagcagggggac
ggcaacgccgagcttttggcccagactctgggcgcaggccgggatgacagccgccttacg
gagctggtgctggagctgtatgataaattacagagccaggcacatcctcttgcatggctc
cgggagacaaggaagttttggcaggcggtgccggagcatttggagcagacgcctttcggc
gagattttgctgaacgacctgaagcagtggtcgaacttctggaacgggcggctgcaacgg
gcggtggaggaaatggccgcctgtccggcggtggaaacagcctacggggcgggctttttg
gctatgtcccggacgatggaagcactgagggaggccacggacaggggctgggacgccgtg
gcagcggtggacctggcgtttcccaggctgaagcccgttcgaggccaggagaacgagtac
tggaaaacccggatgcagaagctgaaggaacgattccaaaaggagctgaaggaggtcatg
gagccctttgccgtgacccaggcagagcatttggaggatctgcgggccatggctccggcc
atgctggccctggtggacctgacggcggattttaccgagagctttcagcaggaaaaggtg
cggcggaatgtggcggatttttccgaccaggagcgttacgccgtggagctgctgacagac
gcggcgggagcgcctacggagctggcaaagcagatttcccgggaatatgtggagatcatg
gtggatgaataccaggataccaaccaggtgcaaaactgtatttttgacgccatttcccgt
aaaggggaaaaccttttcaccgttggagatgtcaagcaaagcatctatcggttccgcctg
gctcagccggagatattcctggagaaatatgagagctatcgccacgccagcgccgccctg
cccgggcaggcgagaaagattttgctcacctgtaatttccgctcccggcccgaagtgctg
gaggctactaactttattttccgcaatattctgtcccgggagatgggcgagatggagtac
ggcgaggcggagaagctgaatgccggggctacctactatgcccccgcgccggaccgagag
acggagctgcacctggtgagcgtagaggacacggaggacgaggaatttgaccgggtacgg
gtggaggcggactttgtagcggggcggatacggaagctgctggaggagaaattccccgtg
cagggggaggacggcaccctgcggcccgtacagccggaggacatcgtgattctgatgcgc
tcaccgggcagccgcatggcggagctgggggcagccctgagccgctgcggtatcccctat
tccggaggcgagcgggaggcattttttgagaccgttgaaatctctacggtgtattcgctt
ttgcagatcattgacaatccccggcaggatgtgccgctgatcgctgtgctgcgatcgccc
ctgtacggctttaccccggatctgctctcccgcattcgcagctgcgccaagggggacttt
tacgaggcctgctgtgcctgcggcgaggagccggtgcaggcatttttgcagcagctttcc
cagcttcgggacctggcggcggagctgccggcggatcagcttttatggcagatgtatgac
aggctgcacattccgggcattttcggagctatggaaaacggggagctgcgccggagccga
ctgctgaatttgtgccgctatgcggaggatctggcgggcatgggaaaaatcactgtgttt
gagctgacggactatctgcgcagtctcatggcccggggcaaggaaccgcagatcgcatca
gagcagagcaccgggggcgtgcgcattatgagcatccaccgctccaagggactggagttt
ccggtggtcatattgtgcgacctgaatcgaaaattcaacaaggacgacatgaagcggcct
gttttggtccactcccggctgggactgggggcagagcgggtggatccggcccggcgggtg
cggtattccacggtgtctaaaaccgctctggccctggagatggaaaaggaaatgctgtcg
gaggaaatgcggcttttatatgtggccatgacccgggctcaggagaagctgatattggta
gactgcatgaaaaaggcgaggagtcaggtggagagcctggcggcgctgacggacctgccc
gtgccgccgcaagtggtccgaggggcggcgaacatggggcaatgggtactgcagacgctg
ctgtgtaccactcaggcaggggtgctgcacacctgggccggggtgcagccggagctgcgg
caggacgcgccgggctggcgggtgtatctccatgaaaacccgaagaatacttcctgtgca
gaggaagaaaagaaacagaaagaaccggagccgcctctttttccggagctgctggagcag
cggtacgggcacatggatgcatcccgggtgccgtctaaggttacggccacccagctcaag
ggccgggaggtggatcagcagatcgccgaaggaaccggccagcacatggccccccggagc
gactttcccgcaccgaaattcctgcagcagcggcaggggctgaccccggcggagcggggt
acagccacgcacctggtgatgcagtacctgccctttgacaccccggcccgggctgatgcg
gtggaggaattcgtgcgcggactggtagaacgccgacttttgacgccggagcagggggca
agcgttaatactttacagatcgcaaaattcctggcatctgacctgtgcgcacagatgcgc
tcggcggagcaggtttggcgggagttccgctttgccctgctggtacctgcggaggtgtac
gatccacgggtccggggagaggagatgatgctccagggtgtggcggatgtgtgcttccgc
acggagaagggcatcgccgtggcggacttcaagacagactacctgcaccccggggaggaa
aaggctcgggcggagcgctaccgggcccagctggaggcatacagcctggccttgagccgg
gtgctggaggcgccggtttgccggagaattctctatttcttttccacgggagcggaagtg
gagatctga
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