Vescimonas fastidiosa: MM35RIKEN_05220
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Entry
MM35RIKEN_05220 CDS
T07633
Name
(GenBank) hypothetical protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa00550
Peptidoglycan biosynthesis
vfa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MM35RIKEN_05220
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vfa01002
]
MM35RIKEN_05220
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfa01011
]
MM35RIKEN_05220
Enzymes [BR:
vfa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MM35RIKEN_05220
Peptidases and inhibitors [BR:
vfa01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
MM35RIKEN_05220
Peptidoglycan biosynthesis and degradation proteins [BR:
vfa01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
MM35RIKEN_05220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Beta-lactamase
YjgF_endoribonc
Motif
Other DBs
NCBI-ProteinID:
BCK78330
UniProt:
A0A810PQQ1
LinkDB
All DBs
Position
531290..532111
Genome browser
AA seq
273 aa
AA seq
DB search
MKGRRVAAAVLAMLFLLAQRAWAVDISATAAVLMDADTGRILYEKNPDRRMLVASTTKIL
TALVVLESCELRSTVKVTQEHMAEGSSMYLKPGEEVTVECLLYGLLLASGNDAALALAEA
CGGVEPCVRAMNRLAGRIGMTDSHFENPNGLDGEAHYSTARDMAKLASYASKQPTFLRIC
STTTAHVGGRTMTNHNRLLREVEGCMGMKTGYTKAAGRTLVSCVEREGRTLVAVTLQDGN
DWADHRALYEFGFSRADAAETAAACGRKERFWI
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcaggcgcgtggcggcggctgtgctggcgatgctttttttgctggcgcagcgg
gcctgggctgtggacatttcggccacggcggcggtactgatggacgcggacacggggcgc
atcctgtacgaaaagaatcccgacaggcggatgctggtggccagcaccaccaagatcctt
acggcattggtggtgctggagagctgcgagctgcgcagtacggtcaaggtgacccaagag
cacatggcagaggggtcgtctatgtacctgaagccgggggaagaggtgacggtggagtgc
ctgctctacggattgctccttgcctccggcaatgatgcagccctggcactggcagaggcc
tgcggcggggtggagccatgcgttagggccatgaatcgtctggccggacgcattggaatg
acggacagtcattttgaaaatcccaacgggttggatggggaggcgcactactccacggcc
cgggacatggcaaagctggcgtcctatgcttcgaagcagcccacttttctgcgcatttgc
tctacgacgacggcccatgtgggaggccgtaccatgaccaaccacaaccggcttctccgg
gaagtggaggggtgtatgggcatgaaaaccggctacaccaaggctgccggacggacgctg
gtatcctgcgtggagcgggaggggcggacgctggtggcggtgaccctgcaggacggcaac
gactgggccgaccacagggcactgtatgaattcggcttttcccgggccgacgcggcagag
acggcggcggcctgtgggagaaaagaacgattttggatttga
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