Vescimonas fastidiosa: MM35RIKEN_05650
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Entry
MM35RIKEN_05650 CDS
T07633
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa03420
Nucleotide excision repair
vfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MM35RIKEN_05650 (pcrA)
03430 Mismatch repair
MM35RIKEN_05650 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfa03400
]
MM35RIKEN_05650 (pcrA)
Enzymes [BR:
vfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MM35RIKEN_05650 (pcrA)
DNA repair and recombination proteins [BR:
vfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MM35RIKEN_05650 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MM35RIKEN_05650 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BCK78373
UniProt:
A0A810Q0U2
LinkDB
All DBs
Position
573655..576108
Genome browser
AA seq
817 aa
AA seq
DB search
MNELEKRFITARREAIALDYKRLNPMQREGVLTTEGPLLLLAGAGSGKTTVLINRVANLL
RYGRGSDTEEITIPISEDEVAFLEQYIQDPQEEMRPLMQYLCAVQPARPWEVLAITFTNK
AAGELKERLERMLGEEALDVWAATFHAACVRILRRDIDKLGYDRNFTIYDTDDSKRVIKD
ILKDLGLEEKQFPTRELLSVISNAKGDMQSPEEFCQLWEQRGDWRKIRVGKVYKLYNQKL
REANALDFDDIILHTVTLLQSDREVRAYYQNKFRYILIDEYQDTNHLQFLLAGLLTGGHG
NICVVGDDDQSIYRFRGADITNILSFEQRYKNARTIRLEQNYRSTQNILDAANAVIRNNE
GRKGKTLWTQNGAGDPVTIKTCFNESDEANFVVGDIMNGYNRGANWRDNAILYRMNAQSN
ALEYAFKRNGVPYKIVGGVKFFDRAEVKDMLAYLCVVCNPADDLRLRRIINVPSRKIGGT
SVEKAQAIAAAEGKSLFEVVCSARSYPELKSAAGRMEEFGQMISELRSLCDELELVEFYS
QVCQRSGYMQMLRDKNDMESRGRLENVQELASSISAFLENDPDDPSLAGFLNDVALYTDL
DGQSDSDNCVTLMTMHSAKGLEFDHVYVTGMDEGVFPGNRAMGEQEEMEEERRLCYVAMT
RARKTLTMTNVRQRMLFGQTEPKMPSRFLEEIPAENMRWIGKPEPRKALQWDEGWNDSWS
GGWGSTPRGTYKTQEIRQQTRHETLQHSTTNRRAPSAGSTQLMQLKAGDQVRHSAFGQGM
VLSVRPMGGDALIEVAFDKVGTKKLMLKAAGVHLTKL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattagaaaaacgatttataaccgctcggcgcgaggcaattgcgctggattac
aaacgactcaatcctatgcagcgggagggcgtgctgaccacagaggggccgctgctgctg
ctggcaggggcgggctccggcaagaccacggtgcttattaaccgggtggcaaacctcctg
cgctatggccggggcagcgacacggaagaaatcaccatccccatttccgaggacgaggtg
gcatttctggagcaatatatccaggatccccaggaggagatgcggcctctgatgcagtac
ctgtgtgccgtgcagccggcccggccctgggaggtgctggctatcaccttcaccaataag
gctgccggtgaactgaaggagcgcttggagcggatgctgggagaagaggcgctggatgtg
tgggcggccaccttccatgctgcctgcgtgcgcattctgcgccgggatattgacaaattg
ggttacgaccgcaactttaccatctatgataccgatgactccaagcgggttatcaaggac
attctcaaggatttaggcctggaggaaaagcaatttcccacacgggagctgctgtcagtg
atctccaacgccaagggagatatgcagtctccggaggagttctgccaactgtgggagcag
cgaggagattggcggaaaatcagggttggtaaagtatataaactttacaatcagaaactc
cgggaggccaatgccctggactttgacgacatcattctgcacacggttacgctgctgcaa
agcgaccgggaggtgcgtgcatactatcagaataagttccgctacatactcattgacgag
tatcaggataccaaccacctgcagtttctcctggcgggcctgctgacgggcggtcacggg
aatatctgcgtggtgggtgatgatgaccagagcatctatcgcttccggggagcagacatc
accaacattctcagcttcgagcagcgctataagaacgcccggaccatccgactggagcag
aattatcgctccacccagaatattttggacgcagccaatgcggtgattcgcaacaatgag
ggacgcaagggcaagaccctgtggacccaaaacggcgccggggatccggtgaccatcaag
acctgcttcaatgagagcgatgaggcaaacttcgtggtgggcgacattatgaacggttat
aatcggggcgccaactggagggataatgccattctttaccgcatgaacgcccagtccaac
gctctggaatatgccttcaagcgcaacggcgtaccttataaaatcgtaggaggcgtaaag
ttcttcgaccgagcggaagtgaaggatatgctggcgtacctatgcgtggtgtgcaatccg
gcggatgatctgcgtctgcggcggatcatcaatgtgccctctcggaagatcggcgggaca
tcggtggaaaaggcgcaggccattgcggcggcagaggggaagtctctgtttgaagtcgtt
tgctctgcccgaagctacccggagctgaagtctgccgccgggcgaatggaagagttcggt
cagatgatctcggagctgcgcagcctgtgcgatgaactggagctggtagaattctacagc
caggtttgtcaaaggagcggctatatgcagatgctccgggataagaatgacatggagagc
cgtggccgactggaaaatgtgcaggagctggcctccagcatcagcgcctttttagaaaat
gacccggatgacccgtccctggcaggatttctcaacgatgtggctctgtataccgatctg
gacggccagtccgacagtgataactgtgtgaccctgatgaccatgcacagtgccaagggg
ctggaatttgaccatgtatatgtcaccggcatggacgagggtgtgttccccggaaaccga
gctatgggcgagcaggaggagatggaggaggagcggcggctgtgctatgtggccatgacc
cgggcccgcaagaccctgaccatgaccaatgttcgccagcggatgctcttcggtcagacg
gagccgaaaatgccgtcacgattcctggaggagattccggcagagaatatgcgctggatt
ggaaagccggagccccgaaaggcacttcagtgggacgaggggtggaatgacagctggtcc
ggtggctggggaagtacaccccgcggaacctataaaacacaggaaattaggcagcagaca
aggcatgagactttacagcattctaccacgaaccggcgggcaccgtcggcggggtctact
cagcttatgcaattaaaagccggagatcaggtacgccatagcgcctttggtcagggaatg
gtgctcagcgttcggcccatgggtggtgacgcgcttattgaggtggccttcgacaaggtg
ggcaccaagaagctgatgctgaaagccgccggagttcatttgaccaagctgtaa
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