Vescimonas fastidiosa: MM35RIKEN_06030
Help
Entry
MM35RIKEN_06030 CDS
T07633
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa00900
Terpenoid backbone biosynthesis
vfa01100
Metabolic pathways
vfa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MM35RIKEN_06030
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vfa01006
]
MM35RIKEN_06030
Enzymes [BR:
vfa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MM35RIKEN_06030
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MM35RIKEN_06030
2.5.1.29 geranylgeranyl diphosphate synthase
MM35RIKEN_06030
Prenyltransferases [BR:
vfa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MM35RIKEN_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BCK78411
UniProt:
A0A810PZ33
LinkDB
All DBs
Position
609150..610022
Genome browser
AA seq
290 aa
AA seq
DB search
MDYQQQYSAYQQAIETYLDGIFTAEGKPYGRLQESIRYSLLAGGKRIRPVLTLEFARLGG
IDWHLALPYACALELVHNYSLIHDDLPCMDDDDLRRGKPTNHKVYGETLAVLAGDAMQPE
AFRLILQARGLSADNRIEAALLLAKACGADGMVAGQVLDTLCHVEDEEGLTGLNRLKTGV
MISAAAELGCVASNMPAYWRQQAVKYADQLGLAFQIRDDMLDVMGDEAVFGKPIGSDKDE
GKITYVNLKGLDGCAQEVEKCTVAAKEAIRDIPDHDFLWELADRMVGRNK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggactatcagcagcaatacagcgcctatcagcaggctattgagacctatttagacggc
atttttaccgccgagggaaagccctatggacggcttcaggagtctatccgctacagcctc
ctggccggcggaaagcgcatccgcccggtgctgacgctggagtttgcccgtctgggcggc
attgactggcatttggccttgccctatgcctgcgccctggagcttgtgcataattattcg
ctgatccacgatgacctgccctgcatggacgacgacgatctgcgccgcggaaagcccacc
aaccataaggtctacggcgaaaccctggctgtcctggccggggatgccatgcagccggag
gctttccgtctcattctccaggcccgtggtctttctgccgacaaccgcattgaggcggcc
ctgcttctcgccaaggcctgcggcgctgacggcatggtggccggtcaggtgctggacact
ctgtgccatgtggaggacgaggagggcctcaccggtttgaaccgtctcaaaaccggtgtt
atgatctccgccgccgcagagctgggctgcgttgcctccaatatgcccgcctattggcgc
cagcaggcggtaaaatatgctgaccagctgggccttgccttccaaattcgagatgatatg
ctggatgtcatgggtgatgaagccgtgtttggcaagcccatcggctccgataaggacgag
ggaaaaatcacctatgtaaatctcaagggcctggacggctgtgcccaagaggttgaaaag
tgtaccgtcgctgccaaggaagccatccgcgacatccccgatcacgacttcctttgggag
ctggctgaccgtatggtaggccgcaataaataa
DBGET
integrated database retrieval system
