Vescimonas fastidiosa: MM35RIKEN_06710
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Entry
MM35RIKEN_06710 CDS
T07633
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa00470
D-Amino acid metabolism
vfa00550
Peptidoglycan biosynthesis
vfa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MM35RIKEN_06710 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MM35RIKEN_06710 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfa01011
]
MM35RIKEN_06710 (murD)
Enzymes [BR:
vfa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MM35RIKEN_06710 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vfa01011
]
Precursor biosynthesis
Amino acid ligase
MM35RIKEN_06710 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
LemA
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
BCK78479
UniProt:
A0A810PNQ5
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All DBs
Position
complement(680539..681924)
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AA seq
461 aa
AA seq
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MTLREYLDSLKDKTVAVIGIGVSNTPLLRLLLREKIRVTACDKRDRAALGALAEELEKDG
CRLQLGEDYLRGLDQDVIFRTPGLRPDVPELLAAAERGSEITSEMEVFFKVCPCTLIAVT
GSDGKTTTTTIIAELLKAAGNTVHVGGNIGNPLLCQADEMQAGDYAVLELSSFQLMTMQQ
SPHIAVVTNLAPNHLDIHKSMEEYVAAKENIFRYQSAGDVAVFNLDNDITREQGGRAPGQ
VRYFSRREEPGEGVFLRGQDIISRMDGRERVIMTTEDIRLPGLHNVENYMAAIAAVDGLV
PDEIIKKFAREFNGVEHRIELVRTYHGARFYNDSIASSPSRTIAGLRSFKEKVILIAGGY
DKHIPFDVLGPEVVAHVKLLVLCGATAGKIRAAVEAAPGYRVGCPEIVEVTPFEKAVEFA
RDRAQSGDVVTLSPACAAFDQFKNFMERGKTFKSIVNGWEE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacactgagggagtatttagattcgctgaaagataagactgtggccgtcatcggcatt
ggggtgagcaacacaccgctgctgcggcttctgctgcgggaaaagatccgggtcacggcc
tgtgacaagcgggatcgagccgccctgggggcgctggcggaggagctggaaaaggatggc
tgccgtttgcagttgggggaggactatctccggggcctggaccaggatgtgatctttcgc
acgccggggctgcgacccgatgtaccggagctgctggcagctgcggagcggggcagtgag
attacctcggagatggaggtattttttaaggtgtgcccctgtacactgattgcggtgacg
gggtccgacggcaagaccaccaccacaaccatcatcgcagagctcctgaaggccgccggg
aacaccgttcatgtgggcgggaatatcggcaatcctctgctgtgtcaggcagacgaaatg
caggcaggggactatgcggtgctggagctctccagcttccagcttatgaccatgcagcag
agcccccatattgcggtggtgacgaatctggcccctaaccatctggatatacacaagagt
atggaggaatatgtggcggccaaggagaatattttccgctaccaatccgccggggatgtg
gccgtatttaacctggacaatgatatcacccgggagcaggggggcagagctccggggcaa
gtacggtatttcagccgtcgggaggagcctggagagggtgttttcctccgggggcaggat
attataagccgcatggacggccgagaaagggtcattatgaccacggaggacattcggctg
ccggggctgcacaatgtagaaaactacatggccgccatcgctgcggtggacggcttggtg
ccggacgagatcattaagaaattcgcccgggaatttaacggtgtggagcatcgcatcgaa
ttggtgcggacctatcacggggcgcggttttacaacgactccattgccagcagtccctcc
cggaccattgcggggctgcgatcctttaaggagaaggtcatcctcattgccggtggatac
gacaagcatattcctttcgatgtgctgggcccggaggtggtcgcgcatgtgaagctgctg
gtgctttgcggcgccacagcagggaagatacgcgctgcggtggaggctgcgccgggttac
cgggtgggctgccctgaaatcgttgaggtgacgccctttgaaaaagcggtggagtttgcc
cgagaccgggcccaaagcggcgatgtggtgaccctttctccggcctgcgcggcttttgac
cagtttaaaaacttcatggaacggggtaaaacttttaagtcaatcgtaaacggctgggag
gaataa
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