Vescimonas fastidiosa: MM35RIKEN_07790
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Entry
MM35RIKEN_07790 CDS
T07633
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MM35RIKEN_07790 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfa03400
]
MM35RIKEN_07790 (recD2)
Enzymes [BR:
vfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MM35RIKEN_07790 (recD2)
DNA repair and recombination proteins [BR:
vfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MM35RIKEN_07790 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
SH3_13
AAA_11
HHH_5
OB_YrrC
Viral_helicase1
PhoH
DEAD
AAA_22
UvrD-helicase
Helicase_RecD
PIF1
nSTAND3
UvrD_C
ABC_tran
AAA_23
NTPase_1
AAA_15
AAA_28
HHH_2
AAA
AAA_12
AAA_29
LD_cluster3
AAA_16
cobW
AAA_18
T2SSE
NPHP3_N
DUF4882
SLFN-g3_helicase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BCK78587
UniProt:
A0A810PWV8
LinkDB
All DBs
Position
796630..798876
Genome browser
AA seq
748 aa
AA seq
DB search
MGYVGTYDRTIFYNPSNKYCIISVKTSDQSVPQQARSAYHHRDNMIRFIAVGYELPQTDK
VSMILDGEWENGKHGVQLQVDKCEEIVPQTKEGVYGYLSSRLIKGVGEKTAALIVNRFGA
DALRVLENEPERLLEIRGITPDKLEDIKASYAESRCVRDLMILLTPFNVTPVTAMKIYEH
FGSRSVDILQKNPYELCQVSGFGFKRVDAIVRKGDLPLNSPMRIHGAVFAALDTGRNEKG
HLFLEEDALAKTGVKLLNENITDGQVKVTPEEVDAVVQDMILKGEIVSSNGNIYQSNVFV
QEDETARKIAEMLAVPPVTLDISESLEYVRKNLGLALSQRQSEAVYMAFRSNLSIITGSP
GTGKTTVLRAIIEVFQMLYPKGKILLAAPTGRASRRMAESTGRNDAKTLHSLLGLLGDSG
PIQKDKQKEPLDADLIIVDESSMIDMWLARQFFSRVRMGTRVILVGDVDQLQSVGAGDVF
RELIDSGLIPVTVLNEIFRQKKGSLIAYNAKRINEANIDLQYGEDFQFVKCQTQEEAADL
ICRIFCEQVALHGIEKVQILSPFRSEGPASVEQLNAAIRELVNPARDEFADLKVGSHYFR
VGDKVMQTKNNAKASNGDIGYIRKMGRNAKNEMDVTIEFSGDRIAEYGMEEMSHMELAYA
TTVHKAMGSEFDIVIMPILRSHYIMLNRNIVYTAITRAKEQVIPVGQKKTLIMAILKKAT
GKRNTQLGERIGKYLKAFTRQNELKKVS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtggggtatgtcgggacttatgaccggacgatcttctataatccgagcaataagtattgc
attatcagcgtgaaaacctccgaccaaagcgtaccgcagcaggcacgaagtgcttaccat
caccgggacaatatgatccggtttatcgccgtcgggtatgaattgcctcaaaccgataag
gtgagcatgatcctggacggcgaatgggagaacggaaaacacggtgttcagctgcaggtc
gataagtgcgaggagatcgtgccgcagaccaaagagggcgtatacggttatctttcctcc
cggctgatcaaaggcgtcggtgaaaagactgccgcattgatcgtaaaccgcttcggtgcc
gacgcattgcgtgtgctggaaaacgagccggagcgactgctggagattcgaggaatcacc
ccggataagctggaggacatcaaagcctcctatgcggaaagccggtgcgtgcgggatctg
atgatcctgctgaccccatttaatgtcacgccggtaacggccatgaagatttatgagcat
ttcggctcccgcagcgtagacattctgcaaaagaacccctatgaattgtgccaggtatcc
ggattcggatttaagagagtcgatgccatcgtccgcaagggcgatctgccgctgaattct
cctatgcggatccacggcgccgtatttgcggcattggatacggggcgcaacgaaaaaggc
catctttttctggaagaagatgcgcttgcgaaaacgggtgtgaagctgctcaatgagaat
attaccgatggacaggtcaaggtcacgcccgaggaagtggacgccgttgttcaggatatg
atcctcaagggtgagatcgtttcaagcaacggcaacatctatcagagcaatgttttcgtg
caggaggatgaaaccgcccggaaaattgcggaaatgctggctgtaccgccggtcacgctg
gatatatccgaatcactcgaatatgtccgcaaaaacctcggtcttgccctttcacaaagg
caaagcgaggcggtgtatatggcttttcgcagtaatctgtctatcatcacaggctctccc
ggtaccggtaaaaccacagtcttgcgggcgatcatagaggtctttcagatgctctacccc
aaagggaagatcttgcttgccgctccgaccggacgagccagccgaagaatggcagaaagc
acgggtagaaacgacgccaaaacgctgcacagccttttagggcttctgggcgacagtgga
ccgatccaaaaggataagcaaaaagaaccgcttgacgccgacctcatcatcgtggacgaa
agctccatgatcgatatgtggctggcaaggcagttcttcagccgtgtccgtatgggtacg
agagttatcctggtcggtgatgtggaccagctgcaaagcgtgggtgccggtgatgtcttc
cgtgagctgattgacagcggacttatccccgttacggtgctcaacgagatcttccgtcag
aaaaaaggaagtctcattgcctataacgcaaagcgcatcaatgaggcaaatatcgacctt
cagtacggcgaagattttcagtttgtaaagtgccagacgcaggaggaagccgctgacctt
atttgcaggatcttctgtgaacaggtcgctttgcacggaattgaaaaggtgcagatactc
tccccgttccgttcggaagggccggcttcggtcgagcagcttaacgccgccatccgtgag
cttgtcaatccggcgagagatgagtttgccgatctgaaggtcggcagccactacttccgt
gtgggcgacaaggtgatgcagacgaaaaacaatgcgaaggcgtccaacggtgacatcggc
tatattcgcaaaatggggcgcaatgcaaagaatgaaatggacgtgacgattgaattttcc
ggcgaccgcattgccgaatacggtatggaagaaatgagccatatggaattggcttatgcg
actaccgtgcataaggcgatgggctcggaatttgatattgtaatcatgcctattcttcgc
agccattacattatgctgaatcggaacatcgtctacacggcgatcacccgtgcgaaggag
caggtcatcccggtcggtcagaagaaaacgctgatcatggcgattctcaaaaaggccacc
ggaaaacgaaatacgcagcttggcgagcgtatcggcaaatatctgaaagcctttacccgc
caaaatgaattgaaaaaggtcagttga
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