Vescimonas fastidiosa: MM35RIKEN_11450
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Entry
MM35RIKEN_11450 CDS
T07633
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MM35RIKEN_11450 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfa03400
]
MM35RIKEN_11450 (uvrB)
DNA repair and recombination proteins [BR:
vfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MM35RIKEN_11450 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MM35RIKEN_11450 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
SWI2_SNF2
Microtub_bd
DUF87
SRP54
Motif
Other DBs
NCBI-ProteinID:
BCK78953
UniProt:
A0A810Q2F3
LinkDB
All DBs
Position
complement(1162378..1164342)
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AA seq
654 aa
AA seq
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MPEFKVVSEYTPSGDQPQAIEKLAAGLEAGLRQQVLLGVTGSGKTYTMAKVIEKVQRPTL
VLAHNKTLAAQLCEEFREFFPENAVEYFVSYYDYYQPEAYIAHTDTFIEKDASINAEIER
LRHSATAALFERRDVIVVASVSCIYGLGDPIDYANMVISLRRGKEYPRDQLLRKLVEIRY
ERNDVAFERNMFRVRGDTVEIYPVYANGYAIRVEFFGDEVDRISEFNPVTGQAQRIIDHV
AIYPASHYVTTKEKMARATEEIERELAERKKFFEDNGKLVEAQRIDQRTRYDVEMMRELG
YCTGIENYSRVISGREPGSPPMTLLDYFPEDFVLFVDESHVTLPQVRAMYNGDRARKESL
VNYGFRLPCAFDNRPLKFEEFEERFRQVVLVSATPGDYERNGADQIVEQVIRPTGLLDPR
VEVRPVTGQIDDLVAEIRVRADRDERVLVTTLTKRMAEDLTEHMKGLGLRVRYMHSDIAT
IERMELIRDLRLGEFDVLVGINLLREGLDLPEVSMVAILDADKEGFLRSETSLIQTIGRA
ARNAEGLVVLYADTVTPSMKAAITETERRRKKQDEYNKAHGIVPKTIRKSVRKVLEISHS
AEEENKKARRKLTEAEREETIRRLEKEMKEASKMLEFEYAALLRDQIIELRGQK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattcaaagttgtatctgaatataccccctccggcgaccagccccaggccatt
gagaagctggcggcggggctggaggcggggctgcgccagcaggtgctgctgggcgtcacc
ggcagcggcaagacctacaccatggccaaggtcatcgaaaaggtccagcggcctaccctg
gtgctggcccacaacaagaccttggcggcccagctttgcgaggagttccgggagtttttc
ccggagaatgcggtggagtatttcgtctcctactacgactactaccagccggaggcgtac
atcgcccacacggacacctttattgaaaaggacgcatccatcaacgccgagatcgagcgg
ctgcgccacagcgccacggcggctctctttgagcggcgggatgtgatcgtggtggcctcg
gtgtcgtgcatttacggtctgggcgaccctattgactatgccaacatggtcatctccctg
cgccgggggaaggagtacccccgggaccagctgctgcgcaagctggtggaaattcgctat
gagcgcaacgatgtggcctttgagcggaatatgttccgggtccggggggacacggtggag
atttatccggtgtatgccaacggatacgccatccgggtggagttcttcggggatgaggtg
gaccgcatcagcgagtttaaccccgttaccggtcaggcccagcgaatcattgaccatgtg
gccatttaccccgccagccactatgtgaccaccaaggagaaaatggcccgggctacggag
gaaatcgagcgggagctggcggagcggaagaagtttttcgaggacaacggcaagctggtg
gaggcccagcgcattgaccagcggacccggtacgatgtggagatgatgcgggagctgggc
tactgcacgggcattgagaattacagccgggtcatctccggccgggagccgggctcgccg
cctatgacgctgctggactactttccggaggacttcgtgctgtttgtggacgagagccat
gttaccctgccccaggtgcgggccatgtataacggcgaccgggcccggaaggagagcctg
gtgaactatgggttccggctgccctgcgcgtttgataaccgaccccttaaattcgaggag
tttgaggagcggtttcgccaggtggtgctggtttcggccacaccgggagactacgaaaga
aacggcgcagaccagatcgtggagcaggtgatccggcccacgggcctgctggacccccgg
gtggaggtgcggcccgttaccgggcagatcgacgacctggtggcagagatacgggtccgg
gcggaccgggacgagcgggtgctggtgacgacccttaccaagcgcatggccgaggacctg
acagagcacatgaagggcctgggcctgcgggtgcggtatatgcactcggacatcgccacc
attgagcgaatggagctgatacgggacctgcggctgggcgaattcgatgtgttggtgggc
attaacctgctgcgggagggcctggacctgccggaggtgtccatggtggccattctggat
gcggataaggagggctttttgcgcagcgagaccagcctcattcagaccatcggccgggcg
gcccgaaatgccgaggggctggtggtgctgtatgcggacaccgttaccccgtctatgaag
gcggctattacggagacggagcgccgccggaaaaagcaggacgagtacaacaaggcccac
ggtatcgtgccgaaaaccattcgcaagagcgtgcgaaaggtgctggagatctcccactcg
gcggaggaggagaataagaaggcccgccgcaagctgacggaggcggagcgggaggagacc
attcgccgcctggagaaggaaatgaaggaagccagcaagatgctggagtttgaatacgcc
gcattgctccgcgaccaaatcattgagctgcggggtcagaaataa
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