Vescimonas fastidiosa: MM35RIKEN_12460
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Entry
MM35RIKEN_12460 CDS
T07633
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa00260
Glycine, serine and threonine metabolism
vfa00460
Cyanoamino acid metabolism
vfa00630
Glyoxylate and dicarboxylate metabolism
vfa00670
One carbon pool by folate
vfa00680
Methane metabolism
vfa01100
Metabolic pathways
vfa01110
Biosynthesis of secondary metabolites
vfa01120
Microbial metabolism in diverse environments
vfa01200
Carbon metabolism
vfa01230
Biosynthesis of amino acids
vfa01240
Biosynthesis of cofactors
vfa04981
Folate transport and metabolism
Module
vfa_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MM35RIKEN_12460 (glyA)
09102 Energy metabolism
00680 Methane metabolism
MM35RIKEN_12460 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MM35RIKEN_12460 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MM35RIKEN_12460 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MM35RIKEN_12460 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MM35RIKEN_12460 (glyA)
Enzymes [BR:
vfa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MM35RIKEN_12460 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BCK79054
UniProt:
A0A810PTD9
LinkDB
All DBs
Position
complement(1299849..1301102)
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AA seq
417 aa
AA seq
DB search
MENFLKESMDYLAREDEQVGAWLRREYRRQQENIELIASENITSPAVMAAVGSCLTNKYA
EGYPGRRYYGGCEFVDEIETLAIDRAKALFGAEYANVQPHSGAQANLAAYAALMQPGDTL
VGMDLAGGGHLTHGAAVNQSGKLYRAVSYGVDEKTGRIDYDRVEDIVRAARPRVLVAGAS
AYPRALDFKAFADIAHRHGALLLVDMAHIAGLVAGGQHESPMPYADVVTTTTHKTLRGPR
GGVILAKEEWGRRIDSAVFPGMQGGPLLHVIAGKAVCFREAMEPAFRDYARRTVENAAAL
AEAMLAKGFDLVSGGTDNHLMLVDLRSHGITGRDLQERLDGLHITLNKNAIPGDPEKPAV
TSGVRMGTPCVTTRGFDAADMVVIAQCIHRACRNEAADRAFILEAVAELTGRHPMEM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaattttttgaaagaaagcatggactatctggctcgggaggacgagcaggtgggc
gcatggctgcggcgggagtatcggcggcagcaggaaaatattgagcttattgcctcggag
aacatcacctctccggcggtgatggccgccgtgggcagctgcctgaccaacaaatatgcc
gaggggtatcccggccggcgatactacggcggatgtgagtttgtggacgaaatagagacc
cttgctattgaccgggccaaggcccttttcggcgcagagtatgccaatgtgcagccgcac
tccggggcccaggccaacctggcggcctacgcggcccttatgcagccgggagacaccctg
gtgggcatggatctggccgggggcggacatctgacccatggggcggcggtgaaccagtcg
ggaaagctttaccgggccgtcagctacggagtggatgagaaaaccgggcgcattgactat
gaccgggtggaggacattgtgcgggcggcgcggcccagggtgctggtggctggagcctcg
gcctatcccagagcgctggattttaaggcctttgcggacattgcccaccgccatggtgcg
ctgctgctggtggatatggcccacattgccgggctggtggcgggaggacagcatgagagc
cccatgccctacgccgatgtggtgaccaccactacccacaagacgctccgggggccccgg
ggcggcgtgatcctggccaaggaggagtggggcaggagaatagacagcgccgtatttccc
ggcatgcagggcggaccgctgctgcatgtgatcgccgggaaggcggtgtgcttccgggag
gctatggagcctgcattccgggactatgcccggcggacggtggaaaatgccgccgccctg
gcagaggctatgctggcaaagggatttgacctggtatccggcggcacggacaaccacctg
atgctggtggacctgcgcagccacggcatcacgggccgggatctgcaggagcggctggac
gggctgcacatcaccctgaacaaaaacgccatccccggcgacccggaaaagcccgccgtc
accagcggcgtgcggatggggacgccctgcgtcaccacccggggatttgatgccgccgat
atggtggttatcgcccagtgcattcaccgggcctgccggaatgaggcggcggatcgggcg
tttattttggaggccgtggcggagctgacaggccggcatcccatggaaatgtga
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