Vescimonas fastidiosa: MM35RIKEN_15850
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Entry
MM35RIKEN_15850 CDS
T07633
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vfa
Vescimonas fastidiosa
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vfa03009
]
MM35RIKEN_15850
Enzymes [BR:
vfa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MM35RIKEN_15850
Ribosome biogenesis [BR:
vfa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MM35RIKEN_15850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRAM
MTS
Cons_hypoth95
Methyltransf_11
Methyltransf_4
PrmA
TRM5-TYW2_MTfase
Ubie_methyltran
RrnaAD
PCMT
Methyltransf_12
UPF0020
TPMT
N6_N4_Mtase
LANC_like
CMAS
Motif
Other DBs
NCBI-ProteinID:
BCK79393
UniProt:
A0A810Q3Q6
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All DBs
Position
pMM35_01:complement(173135..174532)
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AA seq
465 aa
AA seq
DB search
MTSPVKNQVYTAEILGYSSEGLGIARIHGQVVFVHDAIRGEVCDILIMKVGKSAAFGKAV
AWHTVSPHRREPDCPYYRRCGGCAYRHMDYAEELWAKGQRVQDALTRLGGSHVQVEEILG
ASQPLHYRNKSQYPVSPDGKVGFYRARTHCVTDLTACLIQKPQADAAAGALRTYLAEYRV
PGYDEKTGTGLVRHLYVRTNASGQSLLCVVVNGEALPHEDALISALRRAVPDAVGVVLGV
NTRRDNVILGDRYRTLWGRDTLTDTLCGHTFRLSIPSFYQVNRDQAQVLYRRAVDYAGLT
GTELVLDLYCGAGTITLTMADRAKKVIGAEIVSAAVENARENAAANGMENAEFFCGDAGD
IASKLAAEKLHPDVICVDPPRKGLAPEVIDAMAQMGPQRIVYVSCDPATLGRDVKLLEQK
GYRLTRATAVDLFPGTAHVETVALLSRETNPPTAGTTKGACGTSE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacatccccggtgaaaaatcaagtttacaccgctgaaattctgggctactccagcgag
ggcctgggcattgcccgtatccatgggcaggtggtgttcgtccatgatgccattcgcggc
gaggtttgcgatattctcattatgaaggtgggtaagagcgctgccttcggcaaggcggtg
gcttggcacaccgtctctccccaccgccgggagccggactgcccctactaccgccgctgc
ggcggctgcgcctaccgccacatggactacgctgaggagctgtgggccaagggtcagcgg
gtgcaggacgccctgacccgcctgggcggaagccatgtgcaggtggaggaaattctgggc
gcatcgcagcccctgcactaccgcaataagagtcagtaccccgtctccccggacggaaaa
gtgggcttttaccgggcccggacccactgcgtaacggacctgaccgcctgcctcatccaa
aagccccaggcggatgccgccgccggggccctgcggacctatctggcggagtatcgagtg
ccgggttacgatgagaaaaccggcacgggcttggtgcgccatctgtatgtgcgcaccaat
gccagcgggcagtccctcctctgcgtggtggtgaacggggaagccctcccccatgaggac
gccctgatttctgccctgcgccgggcggtgccggatgcagtgggggtggtgctgggggtc
aacacccggcgggataatgtgatcttaggggaccgataccggacgctttggggccgggac
accctcacggacaccctctgcgggcataccttccggctgtctattccctccttttaccag
gtgaatcgggaccaggcgcaggtgctgtaccgccgggcggtggactacgccggccttacg
ggcacggagctggtgctggatctttactgcggcgccgggaccatcaccctgaccatggcg
gacagggcgaaaaaggtcatcggcgcggagatcgtctctgcggcggtggaaaacgcccgg
gagaatgcggcggccaacggcatggagaatgcggagtttttctgcggcgatgccggagac
atcgcctccaagctggcggcggagaagctgcacccggatgtgatctgcgtggacccgccc
cgaaagggcctggccccggaggtcatcgacgccatggcccagatggggccgcagcgcatc
gtctatgtctcctgcgacccggccaccctgggccgggatgtaaagctgctggagcaaaag
ggctatcggctcacccgggccaccgccgtagacctgttcccgggtacggcccatgtggag
acggtggccctcttgtcgcgggaaacaaatccaccaacagctgggacaactaaaggagcc
tgcggcacttcggaatga
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