Vescimonas fastidiosa: MM35RIKEN_17390
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Entry
MM35RIKEN_17390 CDS
T07633
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vfa
Vescimonas fastidiosa
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfa03032
]
MM35RIKEN_17390 (gyrA)
03400 DNA repair and recombination proteins [BR:
vfa03400
]
MM35RIKEN_17390 (gyrA)
Enzymes [BR:
vfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MM35RIKEN_17390 (gyrA)
DNA replication proteins [BR:
vfa03032
]
Prokaryotic type
DNA Topoisomerases
MM35RIKEN_17390 (gyrA)
DNA repair and recombination proteins [BR:
vfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MM35RIKEN_17390 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ATP-grasp_6
FliT
Motif
Other DBs
NCBI-ProteinID:
BCK79547
UniProt:
A0A810PZP1
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All DBs
Position
pMM35_01:303999..306485
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AA seq
828 aa
AA seq
DB search
MSKKPQYDPEEIRYPQQHIVESPLVPEMEKSYIEYAMSVIVGRALPDVRDGLKPVHRRIL
YAMYEDNLTSDRPFKKSATCVGDVLGRYHPHGDASVYDALVRLAQDFSMRYMLVDGHGNF
GSVDGDPAAAYRYTEARLSKISNEMLRDIEKDTVDWDPNFDESRKEPRVLPARFPNLLVN
GSSGIAVGMATNIPPHNLREVIGACICVLDDPNATLGDLMEHIKGPDFPTKGIIMGRSGI
RAAYATGRGRLVVRARHEFEEFGKDRTRIVITELPYQVNKRMLIKNIAEQVEDKRLEGIS
DIRDESDRNGMRIVIELKRDANSQVVLNRLFAQSQLQTTFAINMLALVDNQRQPKILSLR
HIIDEYLTFQEEIIIRRTKFDLNKALERAHLLEGLLIAQDNIDEVIKIIRESYDDARENL
MRRFGLDQVQAQAILDMRLKALQGLDREKLQKEYDDLEEKIAYFRRVLSDDALVRQILKE
ELSALAEKFGDERKTEIQDVEDEIDIEDLIEEEQCVFTLTKAGYIKRTPVSEYAAQSKGG
MGKKGMSTREEDEVVSVFTASTHDYILFFTDTGKVYRKKGYQIPESGKTAKGINMVNVIQ
VETGEKVQAMLHFRETEDKPLYLFMTTRSGTVKRLPVDQLKNIRQSGIRALTLDEGDQLI
SVQETDGEQYILIATHDGQAVRFHESDVRPMGRTAVGVRGIRLREGDYVVGAARAQEGKT
VLTITERGYGKRTPVEDYRITSRGGLGIRNYMVTDKTGPIVGIKVVDGGEDLLLVTESGI
LIRTPVQNIRTAGRATQGVIVMRFKTEGDRVISMALADPEEQAGTAEE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaccccaatacgatccggaggaaattcggtatccccagcagcacattgtg
gagtcgcccctggtgccggagatggagaagtcgtacatcgagtacgccatgtccgttatc
gtgggccgggccctgcccgatgtgcgggacggcctgaagcccgtccaccggcgtattctc
tacgccatgtacgaggacaacctcacctccgaccggccctttaagaaatccgccacctgc
gtgggcgatgtgctgggccggtatcatccccacggcgatgcgtcggtgtacgacgccctg
gtgcgtctggcccaggacttttccatgcgctatatgctggtggacggccacggtaacttc
ggctccgtggatggagaccccgccgccgcctaccgctacaccgaggcaaggctctccaaa
atctccaacgagatgctccgggacattgaaaaggacaccgtggactgggaccccaacttc
gacgagagccggaaagagccccgggtgcttccggcccgattcccgaacctgctggtgaac
ggctccagcggcattgccgtgggcatggccaccaacatcccgccccacaacctgcgggag
gtcattggcgcgtgcatctgcgtgctggatgaccctaacgccaccctgggagacctgatg
gagcacatcaagggccccgacttccccacaaagggcattatcatgggccgcagcggcatc
cgggccgcctacgccacgggccggggccggctggtggtccgggcaaggcacgagtttgag
gagttcggcaaggaccgcacccgcatcgtcattaccgagctgccctaccaggtgaataag
cggatgctcattaagaacatcgccgagcaggtggaggacaagcgcctggagggaatttcc
gacatccgggatgagtccgaccgcaacggtatgcgcatcgttatcgagctgaagcgggac
gccaacagtcaggtggtattaaaccgcctgtttgcccagtctcagctgcagaccaccttc
gccatcaatatgctggccttggttgacaaccagcgccagccgaagatcctgtccctgcgg
cacattattgacgagtacctgaccttccaggaagaaattatcatccgccgcaccaagttc
gacctgaacaaggctttggagcgggcccatctgctggagggcttgctcatcgctcaggac
aacattgacgaggttatcaagatcatccgggagagctacgacgacgcccgggaaaacctc
atgcgccgcttcgggctggaccaggtccaggcccaggccattctggatatgcgtctgaaa
gccttacagggcctcgaccgggagaagctgcagaaggagtacgacgacctggaggagaag
atcgcctatttccgccgggtgctgtccgacgatgctctggtgcggcagatcctcaaggag
gagctttccgccctggccgagaaattcggcgacgagcgcaagaccgagatccaggatgtg
gaggacgagatcgacatcgaggacctcatcgaggaggagcagtgcgtctttaccctcacc
aaggccgggtatatcaagcgtacccccgtcagcgagtacgccgcccagagcaagggcggc
atgggcaagaaggggatgtccacccgggaggaggacgaggtggtgtcggtgttcaccgcg
tccacccatgactacatcctcttcttcaccgacaccggcaaggtctaccgcaagaagggc
tatcagatccccgagagcggcaagaccgccaagggcatcaacatggtcaatgtcattcag
gtggagaccggggagaaggtccaggccatgctccacttccgggagacggaggataagccc
ctgtacctgtttatgaccacccgcagcggcaccgtgaagcggctgcctgtggaccagctg
aagaacattcgccagagcggcatccgcgccctgaccctggacgagggcgaccagctcatc
agcgttcaggagacggacggggagcagtatatcctcatcgccacccacgacggccaggcg
gtgcgcttccacgagagcgatgtgcggcccatgggccgcacggcggtgggcgtccggggc
atccgactccgggagggcgactatgtggtgggcgccgcccgggcccaggagggtaagacc
gtcctcaccatcaccgagcggggctacggcaagcgtacccccgtggaggactaccgcatt
accagccggggcggcctgggtatccgcaactacatggttaccgacaagaccgggcccatt
gtgggcattaaggtggtggacggcggcgaggatctgctgctggtcaccgagagcggcatc
ctcatccgcaccccggtgcagaacatccgcaccgcgggccgcgccacccagggcgttatc
gttatgcgctttaagaccgagggcgaccgggtcatttccatggccctggctgacccggag
gagcaggccgggacggcggaggaataa
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