Vescimonas fastidiosa: MM35RIKEN_17560
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Entry
MM35RIKEN_17560 CDS
T07633
Name
(GenBank) hypothetical protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa00550
Peptidoglycan biosynthesis
vfa01100
Metabolic pathways
vfa01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MM35RIKEN_17560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MM35RIKEN_17560
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfa01011
]
MM35RIKEN_17560
Enzymes [BR:
vfa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MM35RIKEN_17560
Peptidoglycan biosynthesis and degradation proteins [BR:
vfa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MM35RIKEN_17560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BCK79564
UniProt:
A0A810PV23
LinkDB
All DBs
Position
pMM35_01:complement(325900..327933)
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AA seq
677 aa
AA seq
DB search
MKKNNPYRTRLIVLLSVFAAVLCLFGILLVHYQIVEGDSYRALSAAGTAKREVVETSRGI
ITDRNGKVLVSNRLTYTLKFSAESFADDAACNAAVWRLLELCTQEGLTWIDPLPLGRDDP
YGLTDLEPGEAFTTWMDDYKIAYSGEEQITLSLSGDEMMAKLRKIYTISSDYTDQQARLI
AGVRYGAEVSGGYVFAEDVPVRVISQVVDGHFAGVSTGTSSQRVYNTTYAAHILGRVSRI
FAEDWNEKYKDNSDYSMDDLVGKGGVEEAFEQYLHGVNGVKLVTTDKNGKVTGELYAKEP
QPGNTVALTIDIDLQKVAEDSLAATIQSMTGRDGVARGGAAAVIGVGTGDVLALASYPTY
DLNRWDEMYDSWSKDPALPMFNRATDGTYAPGSTFKLCTSVAGLESGVITPSTTIVDRGI
YTYYEFPQPKCWIYNATGGTHGAVNVSQAITVSCNYFFYEVGRLTGIRRLDDYASQFGLG
RSTGIEIGDSKGVLASPEYAEEIGETWTDGQTITAAIGQSYNLFTPLQLANYVATLVSGG
DHYDAHLLKSAKAYDNSSVVYAYNKGPSNHVDMADSTLEAVKSGARGLATGSLSYVFNSC
IVPVGCKTGTAETGGELSNGCFVAFAPYDDPQIAVCVVIEQGGGGSNLAPIARDIINAYF
SSASADTTISGENTLIQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaataatccctaccgcacccggctcatcgtgctgctgagcgtgtttgcggcg
gtgctgtgcctgttcggcattctgctggtgcattaccagatcgttgagggagacagctac
cgggctctttccgccgccggcaccgccaagcgggaggtggtggagaccagccggggcatc
atcaccgaccgaaacggcaaggtgctggtgtccaaccgcctgacctacaccctgaaattc
tccgccgagagctttgccgatgacgctgcgtgcaacgcggcagtgtggcggcttctggag
ctctgcacccaggagggcctcacctggatcgaccccctgcccctgggccgggacgacccc
tacggcctgacggacctggagcccggcgaggcctttacaacctggatggacgactacaag
atcgcctattccggggaggagcagatcaccctgtccctctccggcgacgagatgatggcc
aagctgcggaagatctacaccatttcctccgactacaccgaccagcaggcccggctcatc
gccggggtgcggtacggcgcggaggtttccggcggctatgtgttcgccgaggatgtgccg
gtgcgggtgatcagccaggtggtggacggccactttgcaggcgtgtccacaggcacctcc
agccagcgggtgtataacaccacctatgccgcccacatcctgggccgggtgagccgcatc
ttcgccgaggactggaacgaaaaatacaaggacaacagcgactactccatggacgacctg
gtgggaaagggcggcgtggaggaggcctttgagcaatatctccacggcgtaaacggcgtg
aagctggtgaccaccgacaaaaacggcaaggttaccggcgagctttacgccaaggagccc
cagcccggcaacaccgtggccctgaccattgacatcgacctgcaaaaggtggccgaggac
tccctggccgccaccatccagtccatgaccggcagagacggcgtggcccggggcggcgcg
gcggcggtcatcggcgtgggcaccggggatgtgctggccctggccagctaccccacctac
gacctgaaccggtgggacgagatgtacgacagctggagcaaggacccggccctgcccatg
ttcaaccgggccaccgacggcacctatgcccccggctccacctttaagctctgcacctcc
gtggcggggctggaatccggggtgatcaccccctccaccaccattgtggaccggggcatc
tacacctactacgagttcccccagcccaagtgctggatctataacgccaccggcggcacc
cacggggcggtgaatgtgtcccaggctatcaccgtgtcctgcaactacttcttctacgag
gtggggcggctcacgggcattcggcggctggacgactacgccagccagttcggcctgggc
cgcagcacgggcattgagatcggcgactccaagggggtgctggccagtcccgagtacgcc
gaggagatcggcgagacctggaccgacggccagaccattaccgccgccatcggccagtcc
tataacctcttcacccccctgcagctggcaaactatgtggccactctggtcagcggcggc
gaccattacgacgcccacctgctgaaaagcgccaaggcctacgacaattcctccgtggtc
tacgcctacaacaagggccccagcaaccatgtggacatggcggacagcaccctggaggcg
gtaaagtccggcgcacggggtctggccaccgggagcctcagctatgtctttaacagctgc
atcgtacccgtgggctgtaaaaccggtacggcggagaccggcggcgagctctccaacggc
tgcttcgtggcctttgccccctacgacgatccccagatcgccgtgtgcgtggtcattgag
cagggcggcggcggctccaacctggcccccatcgcccgggacatcatcaacgcctatttc
tccagcgcctccgcggacaccacgatttccggggagaacaccctgatccagtga
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