Vescimonas fastidiosa: MM35RIKEN_17790
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Entry
MM35RIKEN_17790 CDS
T07633
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MM35RIKEN_17790 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vfa03019
]
MM35RIKEN_17790 (pnp)
03016 Transfer RNA biogenesis [BR:
vfa03016
]
MM35RIKEN_17790 (pnp)
Enzymes [BR:
vfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MM35RIKEN_17790 (pnp)
Messenger RNA biogenesis [BR:
vfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MM35RIKEN_17790 (pnp)
Transfer RNA biogenesis [BR:
vfa03016
]
Prokaryotic type
tRNA degradation factors
MM35RIKEN_17790 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
SPATA25
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BCK79587
UniProt:
A0A810PZT6
LinkDB
All DBs
Position
pMM35_01:complement(347408..349558)
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AA seq
716 aa
AA seq
DB search
MSTIITKRQFPGYHKYELDLAGRPLTLEVGKLAELANAAVMVGYGDTRVLCCVTAAPRPR
DGIDFFPLSVDFEEKMYSVGRIPGSFNRREGRPGEKGILTSRVIDRPIRPLFPSDFRNDV
SVMCTVMAVDHDCSPEVAALIGTSAALAISDIPWNGPVAALKVGLVDGKLLFNPTSEQRK
ISDLDVTVVSTGKKVVMIEAGANEVPNDVMFEAIRMAHEENQKQIALINQMVAEIGKPKF
DYPHADFNQELFDKIVHDFMDEAKAAMDTDDKNIREARWNEMIEHWHEKYLEEYPDMDQY
LEEFTYKFQKKIVKAWLLEGHRVDGRQKNEIRPLDAEVAVLPRVHGSGLFTRGQTQVLSV
CTLDTLSANQKLDTIWEETEKRYMHHYNFPGYSVGEAKPARSPGRREIGHGALAERALLP
VIPPVEEFPYAIRVVSEVVSSNGSTSQGSICGSTLALMDAGVPIKAPVAGISCGLIQDDD
GSFTTFIDIQGVEDFHGEMDFKVAGTKKGITAIQMDLKNDGLTMEIIQNALDITYDARCQ
ILDQVMLPCIAEPRPEVSKYAPKMVTMHIDPDKIREVIGKGGSVIQKIVAESGAKIDIDD
DGTIHIASPDAESCAIAKKCIDDIVFVPEVGALYYGRVVRLMTFGAFVELAPGKDGLVHI
SKLADHRIEKVEDACKIGDMMWVKVTEIDEKGRVNLSHKDAMKEIKAKEAAGEPIK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgatcattaccaagcgccagttccccggctaccacaagtatgagctggacctg
gccggccgccccttgaccctggaagtgggcaagctggccgagctggccaacgccgccgtg
atggtgggctatggcgacacccgtgtgctctgctgcgtcaccgctgccccccgtccccgg
gacggcatcgacttcttccccctgagcgtggactttgaggagaagatgtactccgtgggc
cgcattcccggcagctttaaccgccgcgagggtcgccccggcgagaagggcatcctcacc
agccgcgtcatcgaccggcccatccgccctctgttcccctccgatttccgcaacgatgtg
tccgtgatgtgcaccgtcatggcggtggatcacgactgctcccccgaggtagccgccctc
atcggcacctccgccgctctggccatttccgacattccctggaacgggcccgtggccgcc
ctgaaggtgggcctggtggacggcaagctgctctttaaccccaccagcgagcagcgcaag
atcagcgacctggatgtgaccgtggtttccacgggcaagaaggtggtcatgatcgaggcc
ggcgccaatgaggtgcccaacgatgtgatgttcgaggccattcgcatggcccacgaggag
aatcagaagcagatcgccctcatcaatcagatggtcgccgagatcggcaagcccaagttt
gactatccccacgccgacttcaaccaggagctgtttgacaagatcgttcacgacttcatg
gatgaggccaaggccgccatggacaccgacgacaagaatatccgcgaggcccgctggaac
gagatgatcgagcactggcacgagaagtatctggaggagtatccggatatggatcagtac
ctggaggagttcacctacaagttccagaagaagatcgtgaaggcctggctgctggagggt
caccgtgtagatggccgccagaagaacgagatccgtcccctggacgccgaggtggccgtg
ctgccccgtgtccacggctcgggcctgtttacccggggccagacccaggtgctctccgtc
tgcaccctggataccctctccgccaaccagaagctggataccatctgggaggagaccgag
aagcgctacatgcaccactacaacttccccggctactccgtgggtgaggccaagcccgcc
cgcagccccggccgccgggagatcggccacggcgcgctggcagagcgtgccctgctgccc
gtgattcccccggtagaggagttcccctacgccatccgcgtggtgtccgaggtggtctcc
tccaacggctccacctcccagggctccatctgcggctctaccctggcgctgatggacgcc
ggcgtgcccattaaggccccggtggccggcatctcctgcggtctgatccaggacgatgac
ggctccttcaccaccttcatcgacattcagggcgtggaggacttccacggcgagatggac
ttcaaggtggccggcaccaagaagggcatcaccgccattcagatggacctgaagaacgac
ggcctgaccatggagatcattcaaaacgccctggacatcacctacgatgcccgctgccag
attctcgaccaggtgatgctgccctgcattgccgagccccggcccgaggtcagcaagtac
gcccccaagatggtcaccatgcacattgacccggacaagatccgcgaggtcatcggcaag
ggcggcagcgtcattcagaagatcgtggccgagtccggcgccaagatcgacatcgacgac
gacggcaccatccacatcgcctcccccgacgccgagagctgcgccatcgccaagaagtgc
atcgacgacatcgtgttcgtgcccgaggtgggcgccctgtactatggccgcgtggtgcgc
ctgatgaccttcggtgccttcgtggagctggcccccggcaaggacggcctggtgcatatc
tccaagctggccgaccaccgcatcgagaaggtggaggatgcctgcaagatcggcgacatg
atgtgggtaaaggtcacggagatcgacgaaaagggtcgcgtgaacctgagccacaaggac
gccatgaaggagatcaaggccaaggaggccgccggcgagcccatcaagtaa
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