Vescimonas fastidiosa: MM35RIKEN_18490
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Entry
MM35RIKEN_18490 CDS
T07633
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vfa
Vescimonas fastidiosa
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfa03016
]
MM35RIKEN_18490 (truB)
Enzymes [BR:
vfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MM35RIKEN_18490 (truB)
Transfer RNA biogenesis [BR:
vfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MM35RIKEN_18490 (truB)
Prokaryotic type
MM35RIKEN_18490 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BCK79657
UniProt:
A0A810Q009
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All DBs
Position
pMM35_01:428487..429356
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AA seq
289 aa
AA seq
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MANGIIIIDKPAGWTSMDVCAKLRGILKTKKIGHAGTLDPMATGVLPVFVGRATRAVSFA
EGGEKEYVAGLRLGLVTNTQDTEGETLTQSPVAVRREELEAVLPRFTGEISQIPPMFSAI
KINGQKLYDLARQGKEVERKARAVTIFALEVVEQVSETDYILRIRCSKGTYVRTLCHDIG
QALGCGGCMFSLRRTMAAGFTLDESVTLEQMQEGGEALLRPTDSLFRDRPDYRLKTEKQE
ERCRNGNPFFIRENLPEGEYRIYGREGEFLCLSRLQGDTMTSLKNFFGA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggtatcatcattattgacaagcctgccgggtggacatcgatggatgtgtgc
gcgaagctgcgggggatcttgaaaacaaaaaaaatcggccacgccgggaccctggaccct
atggccaccggggtgctgccggtgtttgtgggccgggccacccgggccgtcagcttcgct
gagggcggggagaaggaatatgtggccgggctgcgcctgggactcgtcaccaacacccag
gacacggagggtgagaccctgacccaatctcccgttgcggtgaggagggaagagctggag
gcggtgctgccccggtttaccggggaaatcagccaaatcccgccgatgttttccgccatt
aaaataaacgggcagaagctctatgatttggcaaggcaaggcaaggaggtggagcgcaag
gcccgggcggtgacgatttttgccctggaggtggtggagcaggtgtccgaaacggactat
attctgcgtattcgctgctctaaggggacttatgtgcggaccttgtgccacgacatcgga
caggctctgggctgcgggggatgtatgttctccctgcggcgtaccatggccgccggattc
acattggatgagagcgtgaccctggagcagatgcaggagggcggcgaagcgctgctgcgg
cctacggacagcctgtttcgggaccggcctgattatcggctgaaaacagagaagcaggag
gagcggtgccgcaacggtaatccctttttcattcgggaaaatttgccggagggcgaatac
cgcatttacggccgggagggggagttcctctgcctgagccgcttacagggggacaccatg
acctccctgaaaaactttttcggagcgtga
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