Vescimonas fastidiosa: MM35RIKEN_19280
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Entry
MM35RIKEN_19280 CDS
T07633
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MM35RIKEN_19280 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vfa03021
]
MM35RIKEN_19280 (rpoA)
03400 DNA repair and recombination proteins [BR:
vfa03400
]
MM35RIKEN_19280 (rpoA)
Enzymes [BR:
vfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MM35RIKEN_19280 (rpoA)
Transcription machinery [BR:
vfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MM35RIKEN_19280 (rpoA)
DNA repair and recombination proteins [BR:
vfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MM35RIKEN_19280 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
jr-ZPR1
DUF2325
Motif
Other DBs
NCBI-ProteinID:
BCK79736
UniProt:
A0A810Q1N8
LinkDB
All DBs
Position
pMM35_01:495011..495964
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AA seq
317 aa
AA seq
DB search
MIEIEKPQIECIETPGDASYGKYVIEPLERGYGTTLGNALRRILLSSLPGTAATSIKIAG
VQHEFSTIPGVKEDVTEIVLNIKSLLTKLHCDGGKTVFIEATGPCEVTAGDIKPDGEVEV
LNPELHIATLDVGATLSMEVTLSHGRGYVSADRNKALRPGVIGVIPIDSIYTPVYKVNYT
VEKTRVGNMSDFDKLTLEVWTDSTISARDAVSLGAKILCDHFALFTDLSENVGGEPVIVE
KSGDSQSKQLQMTIEELDLSVRSFNCLKRANINTVEDLISKTEDEMMKVRNLGRKSLEEV
INKLAMMGLHLAGEENN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgagaagcctcagatcgagtgtatcgaaacacctggcgatgcttcctat
ggaaagtatgtgatcgaacccctggagcgcggttacggaacgactctgggcaacgccctg
cgtcgcatcctgctctcctccctgcccggcaccgcagccaccagcatcaagattgcaggc
gttcagcatgagttctccaccatccccggcgtaaaagaggatgtcacggagatcgttctg
aacataaagagcctgctgaccaagctgcactgcgacggtggaaagaccgttttcatcgag
gccaccggcccctgtgaagttacagccggcgacatcaagcccgacggcgaggtggaggtc
ctgaatcccgagctgcacatcgcaaccctggatgtaggcgccaccctgagcatggaagtg
accttgagccatggccgcggctatgtgtccgccgaccggaataaggctctgcgtcccggc
gtcatcggcgtcattcccatcgactccatctatacccccgtgtataaggtcaattacacg
gtggaaaagacccgtgtcggcaatatgtccgatttcgacaagctgacgctggaggtatgg
acggactccaccatttccgcccgggatgctgtgtctctgggcgccaagatcctctgcgac
cactttgctctgttcacggatctgtccgaaaatgtgggcggcgagcccgtcattgtggag
aagtccggcgatagccagagcaagcagctgcagatgaccattgaggagctggacctgtct
gtgcgcagcttcaactgcctcaagcgagccaacatcaacaccgtggaggacctgatttcc
aagacggaggatgaaatgatgaaggtccgcaacctgggacgcaagtctctggaggaagtc
atcaacaaactggccatgatgggtctgcatctggccggcgaagaaaacaactaa
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