Vescimonas fastidiosa: MM35RIKEN_19480
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Entry
MM35RIKEN_19480 CDS
T07633
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vfa
Vescimonas fastidiosa
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vfa03009
]
MM35RIKEN_19480 (rimO)
Enzymes [BR:
vfa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MM35RIKEN_19480 (rimO)
Ribosome biogenesis [BR:
vfa03009
]
Prokaryotic type
ribosomal protein modification factors
MM35RIKEN_19480 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BCK79756
UniProt:
A0A810Q1S1
LinkDB
All DBs
Position
pMM35_01:516202..517530
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AA seq
442 aa
AA seq
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MIVSFISLGCDKNRVNTEQMMALCLQSGMTVQEDCAGSDVVVVNTCGFIDSAKLEAIETI
LSVAELKAAGRVGKILVTGCLSQRYQAELLEELPEVDGIMGTGSYGDIVSAVEQVAAGQK
FSHFADISGPVEELPRVISTPMHYAYLRIAEGCSNRCAYCIIPALRGKYRSRRMEDILTE
AKALSDSGVKECIVIAQDITRYGIDLYKEKKLPELLRELCKLDFHWIRLHYLYPDSITDA
LIDTIASEPKICKYMDIPIQHCNDTILQAMRRRETNAGLHQLFTKLRSRIPGLVLRTTVI
TGLPYEDEAAFEELCDFLQEEKIQRAGAFPYSPEEGTPAAKMLNRVDSDEAQSRAELVMQ
LQSQVMDAFNDTRLGTTLEVLCDGFDPQAMAYVGRSYAESPGIDGVIYFTADRDVQSGQF
VSVRITGTMDGDLTGEVIETEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtatcatttatatccctgggatgtgacaaaaaccgtgtaaacaccgagcagatg
atggccctgtgcctgcaatcgggcatgacggtgcaggaggactgcgccggcagcgatgtg
gtggtggtgaacacctgcggcttcatcgacagtgccaagctggaggccatcgagaccatt
ctctccgtggcggagctgaaggcagcgggccgggtgggtaaaatcctggtcaccggctgc
ctgagccagcgctatcaggcggagcttttagaggagcttccggaggtggacggcatcatg
ggcaccggcagctacggcgacattgtttccgccgtggagcaggtggccgccgggcagaaa
ttcagccactttgccgacatcagcggcccagtggaggaactgccccgggtcatttccacc
cccatgcactatgcctatctgcgcatcgccgaggggtgcagcaaccgctgtgcctactgc
attatcccggccctgcggggcaagtaccgcagccgccggatggaggacatcctcaccgag
gccaaggccctttctgacagcggcgtaaaggagtgcatcgtcatcgcccaggacatcacc
cgctacggcatcgacctgtataaagagaagaagctgccggagctgctgcgggagctgtgc
aagctggactttcactggattcgcctgcactacctctaccccgacagcattaccgatgcg
ctcatagacaccatcgcatccgagccgaaaatctgcaagtatatggatatccctatccag
cactgcaacgataccatcctccaagccatgcgccgccgggagactaacgcgggtctgcat
cagctatttacaaagcttcgcagccgtatccccggcctggtcctgcgcaccaccgtcatc
acgggcctgccctatgaggacgaggccgcctttgaggagctgtgcgacttcctgcaggag
gagaaaatccagcgggccggcgccttcccctattctccggaggaggggaccccggcagcc
aagatgctcaaccgggtggatagcgacgaggcccagagccgtgctgagctggtgatgcag
ctgcaaagccaggtgatggacgcgttcaacgatacccgcctgggcactaccctggaggtg
ctgtgcgacggctttgacccccaggccatggcctatgtgggccgcagctatgccgaaagt
cccggcatcgacggcgtgatttattttacagcggatcgggatgttcagtccggccagttc
gtgtccgtgcgtattacgggcactatggacggcgatctcaccggcgaagtgatagaaacg
gaggaataa
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