Vescimonas fastidiosa: MM35RIKEN_21860
Help
Entry
MM35RIKEN_21860 CDS
T07633
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vfa
Vescimonas fastidiosa
Pathway
vfa03030
DNA replication
vfa03430
Mismatch repair
vfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MM35RIKEN_21860
03430 Mismatch repair
MM35RIKEN_21860
03440 Homologous recombination
MM35RIKEN_21860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfa03032
]
MM35RIKEN_21860
03400 DNA repair and recombination proteins [BR:
vfa03400
]
MM35RIKEN_21860
Enzymes [BR:
vfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MM35RIKEN_21860
DNA replication proteins [BR:
vfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MM35RIKEN_21860
DNA repair and recombination proteins [BR:
vfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MM35RIKEN_21860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_5
AAA_22
AAA_30
RuvB_N
AAA_19
AAA_14
AAA_18
Herpes_Helicase
AAA_28
Mg_chelatase
DUF815
AAA_16
PIF1
AAA_assoc_2
TsaE
DUF1631
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BCK79994
UniProt:
A0A810PWG4
LinkDB
All DBs
Position
pMM35_01:744276..746057
Genome browser
AA seq
593 aa
AA seq
DB search
MYQALYRKWRPITFSQVVGQEHITDTLRRQVAEGRTGHAYLFTGTRGTGKTTCARILAKA
INCLHPVDGAPCNQCEACRGIDEGRLLDITELDAASNNGVDSVRALREEAVYTPSVLKKR
VYIIDEVHMLSTPAFNALLKILEEPPEHLVFILATTELHKVPATILSRCQRYSFKRILPR
DIARQLRYIAGEEQIDLTPDGADILARMAGGAMRDALSLLDQCRSFEGTLSASAILNLLG
LAGGVQTARLMELLLKRDAREALLLLDQLYRDGKDIAALLRELSDLCRDLLILHTAPEGG
AALLTGLYEEKTLSALGANASGSRLFYMAEVLGQTLARLSDSGSLRTEAELCLLKLCDES
LCGDLSALNTRLERLEKAAAKGFAAPASESTSAPAVPQPEIRQPIPSAPAPKAQPVPAKP
EPKIQPAPAEKAPAPSEPKAAASAREDGEIWARLQNQYKAGLRTDKRVFLNRASGVLSGG
VLTVTCPDDMVKRYLDCPEVNGVLQSVTEAQCGSPVRVVFTLGSGKSAPLHRSDTESAPP
KRTKPAPNSTESAPSVPAEKPAETPPWEAPPPASDRMDELLEEAGRLDNFNIK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaggcactctatcgcaagtggcggcccatcaccttttctcaggtggtcggccaa
gagcatatcaccgatacccttcggcgtcaggtggctgagggccgcacgggccacgcctac
cttttcaccggcacccggggtaccggcaagaccacctgcgcccggatcctggccaaggcc
atcaactgcctgcatcctgtggacggcgccccctgcaatcagtgtgaggcctgccggggc
atcgacgagggccgcctgctggacatcaccgagctggacgccgccagcaacaacggcgtg
gacagcgtccgggcccttcgggaggaggcggtgtataccccctcggtgctgaaaaagcgt
gtgtatatcatcgatgaggtgcatatgctctccacccccgcctttaacgctctgcttaaa
atcctggaggagccgccggagcatctggtgttcatcctggctaccacggagctgcataag
gtcccggccaccatcctctcccgctgccagcgctattccttcaagcgtatcctgccccga
gacatcgcccgtcagcttcgctacatcgccggggaggagcagattgacctgaccccggac
ggggcggatattctggcccggatggcaggcggcgccatgcgtgacgcgctgagcctgctg
gaccagtgccgcagctttgaggggaccttgagtgcttcggctattttgaaccttctgggt
ttggcagggggagtgcagaccgcccggctcatggaactgcttctgaagcgggacgcccgg
gaagccctgctgctgctggatcagctctaccgggacggaaaggacatcgccgccctgctg
cgggagctgtcggacctgtgccgggacctactgatcctgcacacggccccggagggcggc
gcggctctgctgacgggactgtatgaggaaaagaccctctcggctctgggcgcgaacgcg
tcgggcagtcgcctgttctatatggcggaggttttggggcagaccctggcccgcctcagc
gacagcggctctctccgcaccgaggcggagctgtgcctgctgaagctctgcgacgaaagc
ctctgcggagacctctcggccctgaacacccgcctggagcggctggaaaaggcggcggcc
aagggctttgcggccccggcttcggaaagcacttcggccccggccgtgccgcagccggaa
atccgccaacccattccctccgctccggcccccaaggcccagcctgtcccggccaagccg
gagccgaaaattcagcccgccccggcggaaaaagccccggcaccgtccgagccgaaagcg
gcggcctccgcccgggaggacggcgaaatttgggcccgcctgcaaaaccagtataaggcc
gggctgcggacggataagcgggtgtttctgaatcgggccagcggcgtcctgtccggcggc
gtgctcaccgtcacctgcccggacgatatggtcaaaagatatttggactgccccgaggta
aacggggtgcttcagagcgtcaccgaggcccagtgcggaagcccggtccgggtggtgttc
accctggggagcggaaagtccgccccgctgcaccggtctgacaccgaatcggcaccgcca
aagcgcaccaaaccggcaccaaacagcaccgaatcggcaccgtctgtcccggcggaaaag
cccgccgaaacgcccccctgggaggccccgccccctgcgtcggaccggatggatgagctg
ctggaggaggccggacggctggataatttcaatataaaataa
DBGET
integrated database retrieval system
