Vitreoscilla filiformis: VITFI_CDS0300
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Entry
VITFI_CDS0300 CDS
T04960
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vff03000
]
VITFI_CDS0300
Transcription factors [BR:
vff03000
]
Prokaryotic type
Helix-turn-helix
Other families
VITFI_CDS0300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
HTH_8
HTH_30
AAA_5
HTH_20
PAS
HTH_23
HTH_7
HTH_29
HTH_28
HTH_17
HTH_1
HTH_Tnp_1
Mg_chelatase
HTH_22
Phage_NinH
CRISPR_Cse2
AAA_2
Phage_CP76
dCache_1
HTH_IclR
PAS_9
AAA
Xre-like-HTH
nSTAND3
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
ASM76079
UniProt:
A0A221KAS2
LinkDB
All DBs
Position
complement(314990..317032)
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AA seq
680 aa
AA seq
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MHHALTPPSSPAQVRQAREQLNNTGTVSAELIGPVLARSWQRSAEAGLLPNGRTPGAPHA
SARQLARALEQHHELVAHARPAMELLHEQTRDTDSLVILADADGMVLHTLGDAEFLQRAE
RVALRPGANWHERWRGTNAIGTALAEGTALVVHGGEHYLERNGFLTCAAAPIHDPGGKIL
GVLDLSGDHRGYHRHTLGLVRSAARMIEHRLFDTRHGQGLRLRLHRQPEGIATLTESLLA
LSEDGWVIGANDSALKLLGLRWSDVGSIRVDQLLALPPGALRQSQPHPQAVTDRQGQTLW
MRLELGRQSITVSPPATPRAPLSALASGQASRAFGAPGATVPPAVAAAFQHQAPPVTRPE
PADPLAALDTGDPTLRNALERARRVLDKPIALLLHGESGVGKEIFARAVHGSGPRKAGPL
VAVNCAALPESLIEAELFGYRPGAFTGASRDGAPGRIREADGGTLFLDEIGDMPLAMQGR
LLRVLQERQVLPLGGGKPVPVDIQLICATHRNLRDEMQAGRFREDLYYRLNGLTLVLPPL
RERHDLPALIDRLLDDIAPERSGQLQLTPELLERFAAYRWPGNLRQLANALRTACALMET
HEWRIDWAHLPDDLADDLRAVRLPNRRHPGSTPSDDPCDLRRVEQETTRRVVAEAGGNLS
EAARRLGISRNTLYRKLREL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacgccctgacacctccttcgtcgccggcccaggttcgccaggcgcgtgaacag
ttgaacaacaccggcacggtttccgccgaattgatcgggccggtgctggcccgttcgtgg
cagcgcagcgccgaagcggggttgttgcccaatggccgcacaccgggcgcaccgcacgcc
tcggcccgccagttggcgcgggcgctggagcagcaccacgagctggtggcccacgcccgc
ccagccatggaactgctgcacgaacaaacccgcgacacggacagcctcgtcatcctggcc
gatgccgatggcatggtgctgcacaccttgggtgacgctgaattcctgcaacgcgccgaa
cgggtggcgctgcgccccggcgccaattggcacgagcgctggcgcggcaccaacgccatc
ggcacggcgttggccgaaggcaccgcgctggtggtgcatggcggcgagcactatttggag
cgcaacgggtttctcacctgcgccgccgcgccgatccacgatccgggcggcaagatcctg
ggggtgctggatttgtccggcgaccatcgcggctaccaccgccacaccttggggctggtg
cgctcggcggcgcgcatgatcgaacaccgcttgtttgacacccgccacggccaaggcctg
cgcctgcgtttgcatcgccaacccgaaggcatcgccaccctcaccgaaagcctgctcgcc
ttgtccgaagacggctgggtgatcggcgccaacgacagcgcgctcaaactgctgggcttg
cgctggtcggatgttgggtcgattcgcgtcgatcaactgttggccttgccccccggcgcg
ctgcgccagagccagccgcacccgcaagccgtcaccgaccgccaaggccaaacgctgtgg
atgcggctcgaattgggccggcaaagcatcaccgtcagccccccggcgacgccgcgtgcg
ccgctcagtgccttggccagcggccaagccagccgcgcattcggcgcgcccggcgcgacg
gtgccgccagcggtggccgccgcgtttcaacaccaggccccaccggtgacccgccccgaa
cccgccgaccctttggcggccctcgacacgggtgacccgaccctgcgcaacgccctggaa
cgcgcccggcgcgtgctggacaaaccgattgccctgctgctgcacggcgaatccggcgtc
ggcaaggaaatttttgcccgggccgttcacggcagtggcccacgcaaggccggcccgctg
gtggcggtgaactgtgcggcgctgcctgaaagcctcatcgaagccgagttgttcggctac
cgccccggcgccttcacgggagccagccgcgacggcgctcccgggcgcatccgcgaagcc
gatggcggcacgctgtttctggatgaaatcggcgacatgcccttggcgatgcaaggccgc
ctgctgcgcgtgctgcaagagcgccaagtgctgccgctgggcggaggcaagccggtgccg
gtggacattcaactcatttgcgccacgcaccgcaacctgcgcgacgaaatgcaggccgga
cgtttccgcgaagacctctattaccgtttgaacggcctgacgctggtgctgcccccgctg
cgcgagcgccacgacctgcccgcgttgatcgaccggttgttggacgacatcgcgcccgag
cgcagcggccaactccaactcacacccgagttgctggagcgcttcgcggcctaccgctgg
ccgggcaacctgcgccaactggccaacgcgctgcgcacggcgtgcgccctcatggaaacg
cacgaatggcgcatcgactgggcccacctgcccgacgatttggccgacgatctgcgggcg
gtgcgcctgccgaatcgccgtcaccctggcagcacgccgagcgacgacccgtgtgatttg
cgtcgcgttgagcaggaaaccacgcggcgcgtggtggccgaggcggggggcaatttgtcc
gaggcggcgcggcgcttgggcatcagccgcaacacgctgtaccgcaagctgcgtgagctg
tga
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