Vitreoscilla filiformis: VITFI_CDS0387
Help
Entry
VITFI_CDS0387 CDS
T04960
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vff
Vitreoscilla filiformis
Pathway
vff03030
DNA replication
vff03410
Base excision repair
vff03420
Nucleotide excision repair
vff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VITFI_CDS0387
03410 Base excision repair
VITFI_CDS0387
03420 Nucleotide excision repair
VITFI_CDS0387
03440 Homologous recombination
VITFI_CDS0387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vff03032
]
VITFI_CDS0387
03400 DNA repair and recombination proteins [BR:
vff03400
]
VITFI_CDS0387
Enzymes [BR:
vff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VITFI_CDS0387
DNA replication proteins [BR:
vff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VITFI_CDS0387
DNA repair and recombination proteins [BR:
vff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VITFI_CDS0387
NER (nucleotide excision repair)
GGR (global genome repair) factors
VITFI_CDS0387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
GP68
Motif
Other DBs
NCBI-ProteinID:
ASM76166
UniProt:
A0A221KAY2
LinkDB
All DBs
Position
complement(412509..415373)
Genome browser
AA seq
954 aa
AA seq
DB search
MSDKTLLLVDGSSYLYRAYHAMPDLRGPGGVPTGAIHGMVAMLRRLPEQVGAAHAVCVFD
APGPTFRDAWYPQYKANRSPMPDDLRAQIEPIHEVVRLMGWPVLMVPGIEADDAIGTLAR
VGAASGHPVVISTGDKDMAQLVTPQVSLINTMTNEALDEAGVLAKFGVRPDQIIDYLTLI
GDTVDNVPGVAKVGPKTAVKWLAEHGSLDAIVAAAGSFKGVTGQNLRDALDWLPQGRRLI
TIKTDCELGEHIAGWPELEGLALREVDRVGLVQFYGRYGFRTWGRELQAELVAEGVEVPP
SPQPLSHEGRGALPSAQAAATEQPAFPPLPLWERAGERGADAGADAAPPPMTLAPAYETI
FTLAQLDTWLTRLRAAPLVALDTETDSLDAMRARIVGLSFAVEPGRAAYVPTGHNYAGAP
EQLPLDEVLARLRPWLEDASAHKIGQHIKYDLHVFANHGVTVRGYVHDTLLQSYVLEAHK
PHNLESLAQRHLDRQGLSYESLCGKGVNQIPFAQVDIERATPYSGEDSEMCLHLHATLFP
QITADAGLRRVYEEIEIPATEVLLRMERHGVLIDPAKLAAQSQQLAQRMIQLEQEVYQIA
GQPFNLNSPKQVGEILFGKLGLPVKKKTASGAPSTDEEVLQELAADYPLPAKLLENRSLA
KLKGTYTDKLPGMINPTTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTAEGRRVREAFI
APPGWVMVSADYSQIELRIMAHLSEDPGLLRAFEQGLDVHRATAAEVFGIAPEAVSSEQR
RYAKTINFGLIYGMGAFGLAQNLGIDQKAARSYIERYFDRFAGVKRFMEATKAAAVEQGY
VETVFGRRLWLPEIQGGSGPRRAAAERQAINAPMQGTAADLIKLAMIAVQKALDAEQRAT
RMVMQVHDELVFEVPAAEIDWAKEAVPRLMAGVADLRVPLLAEVGIGANWDEAH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagaccttgctgctggtggacggctccagctacctttaccgtgcttatcac
gccatgcccgacctgcgcggccccggcggcgtgcccaccggcgccatccacggcatggtg
gcgatgctgcgccgcttgcccgagcaagtcggggcggcgcatgcggtgtgtgtgttcgat
gcgcccggcccgaccttccgcgatgcgtggtatccgcaatacaaagcgaaccgttcgccc
atgccggacgatttgcgggcccaaatcgagccgattcacgaggtggtgcgcctcatgggc
tggcccgttttgatggtgccgggcatcgaagccgatgacgccatcggcaccctggcgcgt
gtcggggcggccagcggccacccggtggtgatttccacgggcgataaggacatggcccag
cttgtcaccccgcaggtcagcctcatcaacaccatgacgaacgaggcgctggatgaggcg
ggcgttctggccaaattcggcgtgcgcccggatcaaatcatcgattacctgactttgatc
ggcgacacggtggacaacgttcccggcgtggccaaagtcggcccgaagacggcggtgaag
tggctggctgaacacggttcgttggatgccatcgtcgcagcggcgggcagtttcaagggc
gtgacgggccaaaacctgcgcgatgcactcgactggctgccccaaggccggcgcctcatc
accatcaaaaccgattgcgagttgggcgaacacatcgccggctggccggagctggaaggc
ttggcgctgcgcgaggtcgatcgcgtcgggttggtgcagttttacgggcgttacggtttc
cgaacctgggggcgtgagttgcaggctgaactggtggccgagggcgttgaggtgcccccc
tctccccaacccctgtcccatgaggggagaggggctttgcccagcgctcaggccgctgca
acagagcaaccggccttcccccctctccccttgtgggagagggccggggagaggggggcg
gatgccggagcagacgcggcccccccgcccatgaccttggcgcccgcgtacgaaaccatc
ttcaccctggcgcagttggacacctggctgacccgcctgcgcgccgcgcccttggtggcg
ctggacaccgaaaccgattcgctcgatgcgatgcgcgcccggatcgtcggcctcagtttt
gcggtcgagccgggacgggcggcctacgtgcccaccggacacaactacgccggtgccccc
gagcaattgccgttggacgaggtgctggcccgcctgcgcccatggctggaggacgccagc
gcccacaaaatcggccagcacatcaaatacgacttgcatgtgttcgccaaccacggtgtg
acggtgcgcggctacgttcacgacacgctgttgcaaagttatgtgctcgaagctcacaag
ccgcacaacctggaaagcctggcccagcgccacctcgaccgccaaggcctgagctacgaa
agcctgtgcggcaagggcgtgaaccagatcccgttcgcgcaggtggacatcgagcgcgcc
accccctacagcggcgaagacagtgaaatgtgcttgcacctgcatgccacgctgttccca
caaatcaccgccgatgcggggttgcgccgcgtctacgaagagatcgaaatccccgccacc
gaggtgctgctgcgcatggagcgtcatggcgtgctcatcgacccggccaaactggccgcg
caaagccagcaactggcccagcgcatgatccagcttgagcaagaggtctatcagatcgcc
ggccagcccttcaacttgaacagcccgaaacaggtgggcgaaatcctgttcggcaaactc
ggcctgccggtgaaaaagaaaaccgccagcggcgccccgtccaccgacgaagaggtgttg
caggagttggcggcggactatccgctgccagccaaactgctggaaaaccgcagcctggcc
aaactcaaaggcacctacacggacaagctgcccggcatgatcaaccccaccacgggccgg
gtacacacccactacgcgcaggcggtggcggtgacggggcgtttgtccagcaacgacccg
aatttgcaaaacatccccatccgcacggcggaagggcgccgggtgcgcgaggctttcatc
gccccgccaggctgggtgatggtgagcgcggactactcacaaatcgagctgcgcatcatg
gcgcacctgagcgaagacccgggcttgctgcgtgccttcgaacagggtttggatgtacac
cgtgccaccgctgccgaagtgtttggcatcgcgcccgaggccgtgtcgagtgagcagcgc
cgctacgccaaaaccatcaacttcggcctgatttatggcatgggtgcgttcgggctggcg
caaaacctgggcatcgaccagaaagcagcgcgcagctacatcgaacgctactttgaccgt
tttgccggcgtgaagcgtttcatggaggccacaaaagcggcggcggtggaacaagggtat
gtcgaaaccgtgttcgggcggcgcttgtggttgccggaaattcaaggtggcagcggcccg
cgccgggcagcggccgagcgccaggccatcaacgcgccgatgcaaggcacggcagccgat
ctcatcaaactggccatgatcgccgtacaaaaagcactcgacgccgagcaacgcgccacg
cgcatggtgatgcaagttcacgacgaactggtgttcgaagtgccagccgccgaaatcgac
tgggcgaaagaagccgtgccgcgcctcatggccggggtggccgatttgcgcgtgcccttg
ctggccgaagtgggcatcggcgccaactgggacgaggcgcactga
DBGET
integrated database retrieval system
