Vitreoscilla filiformis: VITFI_CDS1041
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Entry
VITFI_CDS1041 CDS
T04960
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vff03000
]
VITFI_CDS1041
Transcription factors [BR:
vff03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VITFI_CDS1041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
PBP_like_2
Phosphonate-bd
SBP_bac_11
KduI
HTH_24
PBP_like
Motif
Other DBs
NCBI-ProteinID:
ASM76819
UniProt:
A0A221KCX9
LinkDB
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Position
complement(1110530..1111522)
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AA seq
330 aa
AA seq
DB search
MKGGFLMSLVAPSQTRNITFRQLRVFTEVARHLSFARAAEALHLTPPAVTMQVKELEAAI
ALPLFDRQGRKVSLSTAGEYFLVYAKRLLATLKDADDAMLRFRRLETGLLSVGLVSTAKY
FVPRLLARFREEHPGVELRLQVGANREELVALLAAGEVDLAIMGRPPRELATRAEPFAAH
PHVFVAPPGHPVLAQGDPPLSALAHHPLLVREAASGTRALMDRFFHEHRIEPHIGMVMPS
NETIKQAVMAGMGLGFLSLHTLGLELRARELLLIPVEHTPVMRSWNVVHLQAKLLSPAAE
AFRYFILEQGEAWLAAHDRPFLGDAPFTAP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagggggtttcctcatgtccctcgttgccccatcacagactcgcaacatcaccttc
cgccaactgcgcgtcttcaccgaagtggcacggcacttgagttttgcccgtgccgccgag
gcgctgcacctcacccctccggcggtgaccatgcaggtcaaggagctggaagccgccatc
gctctgccgctgttcgaccgccaaggccgcaaggtcagcttgagcactgccggcgaatac
ttcctcgtttacgccaagcgcctgctggccacactgaaggacgcggacgacgccatgctg
cgttttcgccgcctggaaacgggtttgctcagcgtcgggttggtgagcacagccaagtac
ttcgtgccgcgcttgctggcgcgtttccgcgaagaacaccccggcgtggagctgcgcttg
caggtgggtgccaaccgcgaggagctggtggcgctgctggcagcgggggaggtggatttg
gcgatcatgggccgcccgccgcgtgagttggccacgcgggccgagccattcgcggcgcat
ccgcacgtgttcgtggcaccgccggggcatccggtgttggcgcagggggatccgccttta
tcggccctggcgcaccaccccttgctggtgcgggaagcggcttcaggaacgcgggcgctg
atggatcggttctttcacgagcaccgcatcgagccgcacatcggcatggtcatgcccagc
aacgaaaccatcaaacaagcggtgatggccggcatgggcctgggtttcctgagcctacac
accttgggtttggagctgcgcgcccgcgaactgctgctaatcccggtggagcacacgccc
gtgatgcgcagttggaacgtggtgcatctgcaagccaaactgctttcaccggcggctgag
gcgtttcgttatttcatcttggagcaaggcgaagcctggctggctgcgcacgaccggccc
ttcctgggagacgctcctttcacggcgccttga
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