Vitreoscilla filiformis: VITFI_CDS1042
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Entry
VITFI_CDS1042 CDS
T04960
Name
(GenBank) Ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
vff
Vitreoscilla filiformis
Pathway
vff00630
Glyoxylate and dicarboxylate metabolism
vff00710
Carbon fixation by Calvin cycle
vff01100
Metabolic pathways
vff01110
Biosynthesis of secondary metabolites
vff01120
Microbial metabolism in diverse environments
vff01200
Carbon metabolism
Module
vff_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VITFI_CDS1042
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
VITFI_CDS1042
Enzymes [BR:
vff01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
VITFI_CDS1042
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ASM76820
UniProt:
A0A221KDB2
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Position
1111644..1113113
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AA seq
489 aa
AA seq
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MNAATDAGVITDAKKRYSAGVLKYRQMGYWDADYVPKDTDTLCLFRITPQEGVDPIEAAA
AVAGESSTATWTVVWTDRLTACDSYRAKAYRVEPVPGRPGEYFAWVAYDIILFEEGSIAN
ITASLIGNVFSFKPLKAARLEDIRMPVALVKTFKGPPTGLVVERERLDKFGRPLLGATTK
PKLGLSGRNYGRVIYEGLKGGLDFMKDDENINSQPFMHWRDRFLYVMDAVNKASAATGEV
KGSYLNVTGATMENIYERAEFAKELGSVVIMVDLIIGWSAIQSIANWARKNDMIVHMHRA
GHGTYTRQKTHGVSFRVMAKWLRLAGVDHLHTGTAVGKLEGDPLTVQGYYNVCRDSYTRQ
DLPRGLFFDQDWADMRKVMPVASGGIHAGQMHQLIDLFGDDVILQFGGGTIGHPAGIQAG
AVANRVALETMVKARNEGKDIKNEGPALLRQAASFCTPLKQALDTWGEISFNYTSTDTSD
FAVTPSTSA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgccaccgatgccggggtgatcaccgacgccaaaaagcgctacagcgccggc
gtgctcaagtaccgccagatgggctactgggacgccgattacgtgcccaaggacacggac
acgctgtgcctgttccgcatcaccccgcaggagggggtcgatccgatcgaggcggcagca
gcggtggcgggcgagtcttcgaccgcgacttggacggtggtctggaccgatcgcctcacc
gcttgcgacagctaccgcgccaaggcttaccgggtcgaacccgtgccggggcgtccgggc
gagtatttcgcctgggtggcttacgacatcatcttgtttgaggaaggttcgatcgccaac
atcaccgccagcttgatcggcaacgtcttcagcttcaagccgctcaaggcggcccgcctg
gaagacatccgcatgcctgtggcgctggtcaagaccttcaaaggcccgcccaccggcttg
gtggtcgagcgtgagcggctggacaagtttggccgtccgctcctgggggccaccaccaag
cccaagctgggcctgtccgggcgcaactacgggcgggtgatttacgagggcctcaagggc
gggctggatttcatgaaggacgatgagaacatcaactcgcagcccttcatgcactggcgt
gaccgcttcctctacgtgatggacgcggtgaacaaagccagcgccgccaccggggaggtc
aagggcagttatctgaacgtgaccggcgcgacgatggaaaacatctacgagcgggccgag
ttcgccaaggagctgggttcggtggtgatcatggtggatctgatcatcggctggagtgcc
atccagtccatcgccaactgggcgcgcaagaacgacatgatcgttcacatgcaccgcgcc
ggccatggcacctacacccgccagaaaacccacggggtgagtttccgggtgatggccaag
tggctgcgcttggccggggtggatcacctgcacaccggcacagcggtgggcaagctggag
ggcgatccgctgacggtgcagggttactacaacgtctgccgcgacagctacacgcgccaa
gacctgccacgcggcctgttcttcgaccaagactgggcggacatgcgcaaggtcatgccc
gtggcttcggggggcatccatgccgggcagatgcaccagttgatcgacctgttcggggac
gacgtgattttgcaattcgggggcggcaccatcggccatccggcgggcatccaggcagga
gcggtggccaaccgcgtggcgctcgaaacgatggtcaaggcccgcaacgaaggcaaggac
atcaagaacgaaggcccggccctcctgcgccaggcggcgagtttttgcacgcccttgaaa
caagcgctcgatacctggggcgagatcagcttcaactacaccagcaccgacacgagcgac
ttcgccgtgacgccctccaccagcgcctga
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