Vitreoscilla filiformis: VITFI_CDS1162
Help
Entry
VITFI_CDS1162 CDS
T04960
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vff
Vitreoscilla filiformis
Pathway
vff00061
Fatty acid biosynthesis
vff00071
Fatty acid degradation
vff01100
Metabolic pathways
vff01212
Fatty acid metabolism
vff02024
Quorum sensing
vff04146
Peroxisome
Module
vff_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VITFI_CDS1162
00071 Fatty acid degradation
VITFI_CDS1162
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VITFI_CDS1162
09145 Cellular community - prokaryotes
02024 Quorum sensing
VITFI_CDS1162
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vff01004
]
VITFI_CDS1162
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vff04147
]
VITFI_CDS1162
Enzymes [BR:
vff01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VITFI_CDS1162
Lipid biosynthesis proteins [BR:
vff01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VITFI_CDS1162
Exosome [BR:
vff04147
]
Exosomal proteins
Exosomal proteins of breast milk
VITFI_CDS1162
Exosomal proteins of breast cancer cells
VITFI_CDS1162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
LPD22
DUF2464
Motif
Other DBs
NCBI-ProteinID:
ASM76940
UniProt:
A0A221KDM4
LinkDB
All DBs
Position
1239780..1241729
Genome browser
AA seq
649 aa
AA seq
DB search
MPTNFVQLMLDHAAQRPHAPALREKEFGIWQTITWGELAVLTRKLACGLHGAGLRAGQHI
IIVGDNRPRMNAVMLAAQALGAIPVPLYQDAVAAEYVFPIHNAEVEFAVVEDQEQVDKLL
DVRRQVPTLHRIWYDNPRGLRHYAEPGVASLDTLIEEGAEVYHREPWVFDDGPKKIQPDD
VAAMFFTSGTTGNPKGVVHTHHSLLDRALAGKKFDRLTESEEVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESGATVSIDMKEIGPTYYFAPPRIFEGLLTSVMIRMEDASPLKRGLFH
HFMKLAKRVGPALMDGQPVGLLDKLHYALGSFCIYGPLRNTMGLSRVRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDHEARADTVGVPCEGVEIKLAENGEVLVKSP
GLLKEYYKNPRATAEVLTAEGWYHTSDAGFIDAHGHLKIIDRVKDVGHLKGGANDGAMFA
PKYVENKLKFFPHIKEAVAFGNGRERVCAFINIDMEAVGNWAEKRNLPYAGYTDLASKPE
VLALIRECVEQVNADLARDALLAGSQIHRFLVLHKELDADDGEMTRTRKVKRGFIQDKYQ
VLVDALYAGKPEQFIETAVKFEDGRSGSVSATLKLLDAKTFPAQTQQAA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaccaacttcgtgcaactgatgctcgaccacgcagcgcagcggccccacgcgccg
gccttgcgcgagaaggaattcgggatttggcaaaccatcacctggggtgagctggccgtg
ctcacccgcaagctggcgtgtggcctgcatggcgccgggttgcgcgccggccagcacatc
atcatcgtgggggacaaccgcccgcgcatgaacgccgtgatgctggccgcgcaagcgctg
ggtgccatccccgtgccgctctaccaggatgcggtggctgctgagtatgtgttcccgatc
cacaacgccgaggttgagttcgcggtggtggaagaccaggagcaggtggacaaactgctc
gacgtgcgccgccaagtgcccaccctgcaccgcatttggtacgacaacccgcgtggcctg
cgccactacgccgagcccggtgtggcgtcgctggacaccttgatcgaagaaggtgccgag
gtctaccaccgcgagccgtgggtgtttgacgacggccccaagaaaatccagccggatgac
gtggccgccatgttcttcacgtccggaaccaccggcaacccgaagggcgtggtgcatacc
caccactcgctgctggatcgcgctttggcgggcaaaaagtttgaccgcctgaccgaatcc
gaagaagtgctggcctacctgccgccggcgtggatcgggcaaaacatcttcagttatgcg
cagtggctggcctgcggttacgtggtgaactgccccgaatccggcgccaccgtcagcatc
gacatgaaggaaatcgggccgacctactacttcgccccgccccggatttttgaaggcctg
ctcaccagcgtgatgatccgcatggaggatgccagcccgctcaagcgcggcctgttccac
cacttcatgaagctggccaagcgcgtcggcccggcgctgatggacggccagccggtcggt
ttgctggacaaactgcactacgccctgggcagcttctgcatttacggcccgctgcgcaac
accatgggcctgagccgggtgcgcgtggcctacacggcgggcgaggccatcggcccggat
ttgttcacgttctaccgctccattggcatcaacctgaagcagctttacggctcgacggaa
acagcagtgttcgtctgcctgcaacccgaccacgaagcccgtgccgacaccgtgggcgtg
ccctgcgaaggcgtcgaaatcaagctggcggagaacggcgaagtgctggtgaagtcgccg
gggctgctcaaggaatactacaaaaacccccgcgccaccgccgaggtgttgaccgctgaa
gggtggtatcacaccagcgacgccggcttcatcgacgcccacggccacctcaagatcatc
gaccgggtgaaggacgtgggccacctgaagggcggcgccaacgatggcgcgatgttcgcg
cccaagtacgtggagaacaaactcaagttcttcccgcacatcaaggaagcggtggcgttt
ggcaacgggcgcgagcgcgtctgcgcgttcatcaacatcgacatggaagccgtgggcaac
tgggccgaaaagcgcaatctgccctacgccggttacaccgacttggcgagcaagcccgag
gtgctggcgctgatccgcgagtgtgtcgagcaagtcaacgctgatctggcgcgggatgcg
ctgctggccggcagccaaatccaccgcttcttggtgctgcacaaggagctggacgccgac
gacggcgaaatgacccgcacccgcaaggtcaagcgcgggttcatccaagacaagtaccag
gtgctggtggacgcgctctacgccggcaagcccgagcagttcatcgaaacggcggtcaag
tttgaggacgggcgcagcggcagcgtctcggccacgctcaagctgctggacgccaagacc
ttcccggctcaaacccaacaggcggcctga
DBGET
integrated database retrieval system
