Vitreoscilla filiformis: VITFI_CDS1267
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Entry
VITFI_CDS1267 CDS
T04960
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vff
Vitreoscilla filiformis
Pathway
vff03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VITFI_CDS1267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vff03021
]
VITFI_CDS1267
03400 DNA repair and recombination proteins [BR:
vff03400
]
VITFI_CDS1267
Enzymes [BR:
vff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VITFI_CDS1267
Transcription machinery [BR:
vff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VITFI_CDS1267
DNA repair and recombination proteins [BR:
vff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VITFI_CDS1267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ASM77045
UniProt:
A0A221KDJ2
LinkDB
All DBs
Position
1334849..1335838
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AA seq
329 aa
AA seq
DB search
MQTNLLKPKAIVAEPLGGYRAKVTLEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VLHEYSAIDGVSEDVVHIMLNLKGVVFRLHNRDEVTLVLRKEGEGPVTAADIQTPHDVEI
VNPDHVIAHLAQGGKLDMQIKVEKGRGYVPGNMRRYGDEPTKSIGRIVLDASFSPVKRVS
YAVENARVEQRTDLDKLVMEIETNGAISPEEAIRASAKILVEQLAVFAQLDAGDVGSIID
QSAKSAAVFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSL
NEIKEVLASRGLTLGARLENWPPQGLDKR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatctgctgaaacccaaagccatcgttgcggagccgctgggcggctaccgc
gccaaggtcacgctggagccgttcgagcgtggttacggtcatacgctgggcaacgcgctg
cgtcgcgtgctgctgtcgtcgatggtgggttacgcgccgaccgaagtgacgatcgccggg
gtgctgcatgagtactcggccattgacggtgtgtccgaggatgtggttcacatcatgctc
aacctcaagggcgtggtgttccgtctgcacaaccgcgacgaagtgaccctggtgctgcgc
aaggaaggcgagggccccgtcacggccgctgacatccagaccccgcacgacgtcgaaatt
gtcaacccggatcacgtcatcgcccatctggctcaaggcggcaagctggacatgcagatc
aaggtcgaaaaaggccgtggttacgtgccgggcaacatgcgtcgttatggcgatgagccg
accaagtcgatcggccgcatcgtgctggacgcttcgttctcgccggtcaagcgcgtgagc
tacgccgtcgaaaacgcccgcgtggagcagcgtaccgacttggacaagctggtgatggag
atcgaaaccaacggcgccatctcgcccgaggaagcgatccgcgcttcggccaagatcctg
gtggaacaactggccgtcttcgcccagctcgacgctggcgatgtgggcagcatcatcgac
caaagcgccaagagcgcggcggtgttcgatccgatcctgctgcgtccggtggacgagctc
gaactcaccgtgcgttcggccaactgcctgaaggccgaaaacatctattacatcggtgat
ctgatccagcgcaccgagaccgagctgctcaagaccccgaacctgggtcgcaagtcgctc
aacgaaatcaaggaagttctggcctcgcgtggcctgaccctgggtgcccgcctagaaaac
tggccgccccaaggtctggacaagcgctga
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