Vitreoscilla filiformis: VITFI_CDS1387
Help
Entry
VITFI_CDS1387 CDS
T04960
Name
(GenBank) LysR family transcriptional regulator
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vff03000
]
VITFI_CDS1387
Transcription factors [BR:
vff03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VITFI_CDS1387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ASM77165
UniProt:
A0A221KDW2
LinkDB
All DBs
Position
complement(1454094..1455008)
Genome browser
AA seq
304 aa
AA seq
DB search
MDLRHMRYFLALAEERNFGRAAERLHMAQPPLTRQIRALEEELGTLLFIRTTKGVELTEA
GQALLDEVPNLLSLAQRAKERTQRAGQGLTGRLDVATFGSGILDAIPRVLARFHRERPEV
KIVLHNLTKAEQLDALRERRITVGFNRLVPPQDDLCVEQVMREPMMVGLPVRHPLAQKTA
ITIRDLDDVPLILYPNIPMRGLAEEVMAAFRQEGALLRVEQQVEDVLTCIALVASGFGLC
ITTASTASLQLPGVTYRPLQSRHLREVELSCLYRRADPSPVLAAFLAVVRGFAAEHGQPP
LTGA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcgccacatgcgctacttcctcgcgctcgctgaagagcgcaactttggccgc
gctgccgagcgcctgcacatggcgcagccgccgctcacgcgccaaatccgcgcattggag
gaggagctgggcacgctgctgttcatccgcaccaccaagggcgtggagctgaccgaagcc
ggccaagccctgctggacgaagtgcccaacctgctcagcctggcgcagcgcgccaaggaa
cgcacccaacgcgccgggcagggcctcaccggtcggctggacgtggccacgtttggttcg
ggcatcctggatgcgattccgcgtgtgctggcacgttttcaccgcgagcggcccgaggtg
aaaatcgtgctgcacaacctcaccaaagccgaacagctcgacgcgctgcgcgagcgccgc
atcaccgttggcttcaaccggctggtgccgccgcaggatgacttgtgcgtcgaacaggtg
atgcgtgagccgatgatggtcggcttgccggtgcgccatccgctggcacaaaagaccgcc
atcaccatccgcgatctggacgacgtgccgctcatcctctaccccaacattcccatgcgc
gggctggcggaagaagtgatggcggcgtttcgccaagaaggcgcgttgctgcgcgtcgaa
cagcaggtcgaagacgtgctgacgtgcattgccttggtggcttcgggttttgggctgtgc
atcaccaccgcctcgacggccagtttgcaattgcccggcgtgacttaccgaccactgcaa
agccgccatctgcgcgaggtggagctgagttgcctctaccgccgcgccgacccgtcgccc
gtgcttgccgctttcctggcggtggtgcggggctttgcggcagaacacggccaacctcca
ctcacaggcgcttga
DBGET
integrated database retrieval system
