Vitreoscilla filiformis: VITFI_CDS1448
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Entry
VITFI_CDS1448 CDS
T04960
Name
(GenBank) uncharacterized protein
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vff03019
]
VITFI_CDS1448
03016 Transfer RNA biogenesis [BR:
vff03016
]
VITFI_CDS1448
Enzymes [BR:
vff01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
VITFI_CDS1448
Messenger RNA biogenesis [BR:
vff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VITFI_CDS1448
Transfer RNA biogenesis [BR:
vff03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
VITFI_CDS1448
Prokaryotic type
VITFI_CDS1448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
ASM77226
UniProt:
A0A221KDZ6
LinkDB
All DBs
Position
1514294..1514698
Genome browser
AA seq
134 aa
AA seq
DB search
MQPVARGALVATVTISASVWSVPALAREPLPAVEAEAALPVVTWAELPSQARKTYRLILA
GGPFPYEKDGTVFGNRERLLPRKPRGHYREYTVPTPGSRDRGARRMVCAGEVPKEPEACF
YTEDHYASFRRVAP
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacctgtggcacgcggcgcgttggtggcaactgtgaccatctcagcgagtgtgtgg
agtgtacctgcactggcgcgtgagccgttgccggccgttgaagctgaagcagcgttgccc
gttgtcacctgggcggagctgcccagccaagcgcgcaaaacctaccgtttgattttggcc
ggagggccgtttccctacgagaaggacgggacggtttttggcaatcgcgagcgcttgttg
ccgcgcaaaccacgaggccattatcgcgagtacaccgtgccgacgccgggttcgcgagat
cgcggtgcgcggcgcatggtctgtgcgggggaagtgcctaaagagcccgaggcgtgcttc
tacaccgaagaccactatgcgagtttccggcgcgtggcgccctag
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