Vitreoscilla filiformis: VITFI_CDS1627
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Entry
VITFI_CDS1627 CDS
T04960
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vff03000
]
VITFI_CDS1627
Transcription factors [BR:
vff03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VITFI_CDS1627
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
HTH_20
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ASM77405
UniProt:
A0A221KEK1
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All DBs
Position
1706476..1707402
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AA seq
308 aa
AA seq
DB search
MNISFRQLRLFLALAEHGSVGAAARVMHVTQPTASMQLREVQDAAGLPLYTLVGRRVQLT
EAGHALATTARCMLDDWIDWEQQLAAWKGLTGGRLRVAVVSTAKYFVPRLLGGFCARYPD
IDIRLEVLNRDGVLQRLREQRDDLAIMSMPPTDWALDDVVFLTNPLVLIGPGNHPLAGRT
SLTLADVAGERFILRERGSGTRMAVDAHFRAVGFQPQVRLELGSNEAIKEAVAGGLGLSV
LSAHTLHGRAREHGVQVWPVAGFPLAGQWHVVCRQVRALSPIARVFREHLLSQAERVAAD
VAADAPTS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcagttttcggcagttgcgtctctttctcgccttggctgaacacggcagcgtc
ggtgcggcggcgcgggtgatgcatgtgacgcagccgacggcctccatgcagttgcgcgaa
gtgcaagatgcggcaggcttgccgctctacaccttggtggggcggcgcgtgcagctcacc
gaggcggggcacgccctggccacgaccgcccggtgcatgctggacgattggatcgactgg
gaacagcaactcgccgcttggaaggggctgaccggtggacgcttgcgtgtggccgtggtg
agcaccgccaaatacttcgtgccgcgtttactgggggggttttgcgcccgctatccagac
atcgacatccgcctggaagtgctgaaccgggacggcgtgctccagcgcctgcgtgagcag
cgcgatgatttggccatcatgtccatgccgcccaccgactgggcgctggatgacgtggtg
ttcctcaccaaccccctggtgctgattgggccggggaatcatcccctggcagggcgtacc
tcattgacgctggcagatgtggcgggcgagcgattcatcttgcgtgagcgcggttcgggc
acgcgcatggcggtcgatgcgcatttccgcgctgtgggttttcagccccaggtgcggttg
gagctgggcagcaacgaggccatcaaggaggcggtggcggggggcttggggttgtcggtg
ctgtcggcacacaccttgcacggtcgagcgcgtgaacacggggtgcaagtgtggcccgtg
gcggggtttccgcttgcggggcagtggcatgtggtgtgccgtcaggtgcgggcactgagt
ccgattgcacgggtgttccgcgagcatctgttgagccaagccgagcgagtggccgccgat
gtggccgccgacgcccccacgtcttga
DBGET
integrated database retrieval system
