Vitreoscilla filiformis: VITFI_CDS1680
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Entry
VITFI_CDS1680 CDS
T04960
Name
(GenBank) Exodeoxyribonuclease VII
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
vff
Vitreoscilla filiformis
Pathway
vff03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VITFI_CDS1680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vff03400
]
VITFI_CDS1680
Enzymes [BR:
vff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
VITFI_CDS1680
DNA repair and recombination proteins [BR:
vff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VITFI_CDS1680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF4164
BLOC1_2
CENP-Q
CCDC113_CCDC96_CC
MerR-DNA-bind
Surfac_D-trimer
Motif
Other DBs
NCBI-ProteinID:
ASM77458
UniProt:
A0A221KEK3
LinkDB
All DBs
Position
1754602..1754847
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AA seq
81 aa
AA seq
DB search
MPDAHAPTPLPEPASYEQALAELEHLVQAMEAGRLPLDQLMNSHHRATALLAFCREQLQA
LETQVQRLDASTGQLTAWSAA
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgcccacgcgcccaccccgctccccgaacccgccagctacgaacaagccctg
gccgagttggaacatctggtgcaggccatggaggccgggcggctgccgctggatcagctc
atgaacagccaccaccgtgccaccgctttgctggcgttttgccgcgagcagttgcaagcc
ctcgaaacgcaggtgcagcggctcgacgccagcaccggccaactcaccgcctggagcgcc
gcatga
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