Vitreoscilla filiformis: VITFI_CDS1777
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Entry
VITFI_CDS1777 CDS
T04960
Name
(GenBank) uncharacterized protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vff03400
]
VITFI_CDS1777
DNA repair and recombination proteins [BR:
vff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
VITFI_CDS1777
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
AAA_10
FtsK_SpoIIIE
TrwB_AAD_bind
T2SSE
AAA_16
AAA_30
ResIII
AAA_28
AAA_25
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASM77555
UniProt:
A0A221KF02
LinkDB
All DBs
Position
complement(1857842..1859305)
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AA seq
487 aa
AA seq
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MLPALANRHGLITGATGTGKTVSLQALAEGFSLRGVPVFMADVKGDLTGITQPGGLSPKL
QATLQERGLDVPEPVACPATLWDVFGTQGHPVRATISDLGPLLLARMLALNDTQSGVLNL
VFKIADDQGLLLLDLKDLRAMLQYVGENAREFTTDYGNVSAASVGAIQRGLLQIEQQGGD
QFFGEPMLNIADFMQTVEGKGVVNILAADKLMAAPRLYATFLLWLLSELFESLPEVGDLD
RPKLVFFFDEAHLLFKDAPAALVERIELVVRLVRSKGVGVYFVTQNPLDVPDTILGQLGN
RIQHALRAFTPRDQKAVRAAADTMRANPSLDIASAITELGVGEALVSLLDAQGRPCVTER
VWMRLPGSHIGPITPEQRQALRQTSLVAGVYEQAVDRESAYEKLKGAPAEAAHSPRASTS
TPRETGSPQTGGLGDWLFGSTGPRGAQRDGLAQILAKSAMRAIGSQVGRDIVRGVLGSIL
GGGGRRR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgttgcctgccttggccaaccgccatggcctgattaccggcgccacgggcactggcaag
acggtcagtttgcaagccttggctgaggggttttcgctgcggggggtgcccgttttcatg
gccgatgtgaagggcgatctgacggggatcacccagcccggcggcctcagccccaaactc
caagccacgctgcaagagcgcggcttggacgtgcccgaacccgtggcctgccccgccaca
ctgtgggacgtgttcggcacccaaggccatccggtgcgcgccaccatttcggatctgggg
ccgctgctgctggctcggatgctggcgctgaacgacacccagtcgggggtgctcaacctc
gtgttcaaaatcgcggacgaccaaggcttgttgctgctcgatctgaaagatctgcgcgcc
atgctgcaatacgtcggcgaaaacgcccgcgagttcaccaccgactatggcaacgtcagc
gctgcatcggtgggggcgattcagcgcgggttgttgcagatcgagcaacaaggcggcgac
cagtttttcggcgagccgatgctcaacatcgccgatttcatgcaaaccgttgagggcaag
ggcgtcgtcaacattttggcggctgacaaactcatggccgcgccccggctgtacgccact
tttttgctgtggctgctctccgagctgttcgaaagtctgcccgaagtgggcgacttggat
cgacccaaattggtgtttttcttcgacgaagcccacttgctgttcaaagatgccccggcg
gcgttggtggagcgcatcgaattggtggtgcggctggtgcgctccaaaggcgtgggcgtg
tacttcgtcacccaaaacccgctggatgtgcccgacaccatcctcggccagctcggcaac
cgcatccagcacgccctgcgagccttcacgccacgcgatcaaaaagccgtgcgcgccgct
gccgacaccatgcgcgccaacccctcgctcgacatcgccagcgccatcaccgagctgggc
gtcggcgaagccctggtgagtttgctggatgcgcaaggccgcccctgcgtcaccgaacgg
gtgtggatgcgcttgcctgggagccacatcggccccatcacgccggaacagcgccaagcg
ctgcgccaaacctcgctggtggcgggggtgtacgaacaggcggtcgatcgggaatcggct
tacgaaaaactcaaaggtgcccctgccgaagcagcccacagcccccgtgccagcaccagc
accccccgcgaaacgggcagcccccaaacaggcggcttgggcgattggctgttcggttcg
acgggcccacgcggcgcccaacgggatgggctggcgcagatcttggccaagtcggccatg
cgggccattggctctcaggtcgggcgggacatcgtgcgcggggtgctgggctccattttg
ggcggaggcggacggcggcgttaa
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