Vitreoscilla filiformis: VITFI_CDS1947
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Entry
VITFI_CDS1947 CDS
T04960
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vff
Vitreoscilla filiformis
Pathway
vff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VITFI_CDS1947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vff03019
]
VITFI_CDS1947
03016 Transfer RNA biogenesis [BR:
vff03016
]
VITFI_CDS1947
Enzymes [BR:
vff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
VITFI_CDS1947
Messenger RNA biogenesis [BR:
vff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
VITFI_CDS1947
Transfer RNA biogenesis [BR:
vff03016
]
Prokaryotic type
tRNA degradation factors
VITFI_CDS1947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
ASM77725
UniProt:
A0A221KFG8
LinkDB
All DBs
Position
2024227..2026521
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AA seq
764 aa
AA seq
DB search
MSLFNKVTKSFQWGPHQVTMETGEIARQATGAVLVDIEGTVVLATVVAAKDAKPGQDFFP
LTVDYLEKTYAAGKIPGSFFKREGRPSELETLTSRLIDRPIRPLFPEGFFNEVQVVVHVL
SLNPEVQADIAALIASSAALSISGIPFNGPIGAARVGYVNGEYVLNPGKTELANSKMDLV
VAGTETAVLMVESEADQLPEDVMLGAVVFGHDQGKIAINAIHELVRDAGKPEWQAAGLWS
PPAKDEAFIAKVSELAEGALRAAYQIRSKQARTQACRAAYAAAKAALTAEGVAFDEVKVE
GLLFDIEARIVRSQILAGEPRIDGRDTRTVRPIEIRNSVLPRVHGSSLFTRGETQALVIA
TLGTERDAQTIDALAGEFSERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVPV
LPAKEDFPYTIRVVSEITESNGSSSMASVCGGCLSMLDAGVPLKAHVAGIAMGLIKEGNR
FAVLTDILGDEDHLGDMDFKVAGTTQGVTALQMDIKIQGITKEIMQVALAQAKEARMHIL
GIMVGAVGGAKDEVSEFAPRLYTMKINPEKIRDVIGKGGATIRALTEETGTQINIAEDGT
ITIASTEAAKAEAAKKRIEQITAEAEIGKVYEGPVVKILDFGALVNVLPGKDGLLHISQI
AHQRVEKVTDFLTEGQIVKVKVLETDEKGRIKLSMKALLERPEGMEEERFERSRREDRGD
RFDRGDRRDRGPRRERAEQAPRTEAAAPAEPAADAPQQQQQQQQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcttcaataaagtcaccaaatcgttccaatggggcccgcatcaggtcacgatg
gaaaccggcgaaatcgctcgccaagccaccggcgctgtgctggtggacatcgaaggcacc
gtggtgctggccaccgtggtggccgccaaagacgccaagccgggccaagacttcttcccg
ctgaccgtcgattacctcgaaaagacctacgccgccggcaagatcccgggcagcttcttc
aagcgcgaaggccgccccagtgagctggaaaccctgaccagccgcctgatcgaccgcccg
atccgcccgctgttcccggaaggcttcttcaatgaagtgcaagtggtggtgcatgtgctc
agcctgaacccggaagttcaagccgacatcgccgccctgatcgcttccagcgccgcgctg
agcatctccggcatcccgttcaacggcccgattggcgccgcccgcgtgggttatgtcaac
ggcgaatacgtgctcaaccccggtaagaccgagctggccaactccaagatggatttggtg
gtggcaggtacggagaccgccgtgctgatggtcgagtccgaagccgaccaactgccggaa
gacgtgatgctgggcgccgtggtgttcggccatgaccaaggcaagatcgccatcaacgcc
atccacgaactggtgcgcgacgctggcaagcccgagtggcaagccgctggcctgtggtcg
cccccggccaaggacgaagcgttcatcgccaaggtgagcgagctggccgaaggtgccctg
cgtgcggcctaccaaatccgctccaagcaagcccgtacccaagcctgtcgcgcagcctac
gctgctgccaaggcggccttgaccgctgaaggcgtggctttcgacgaagtcaaggtcgaa
ggcttgctgtttgacatcgaagcccgcatcgtgcgcagccagatcctggctggcgagccg
cgcattgatggccgtgacacccgcaccgtgcgcccgatcgaaatccgcaacagcgtgctg
ccgcgtgtgcatggttcgtcgctgttcacccggggcgaaacccaagccctggtgatcgcc
accctgggcaccgagcgcgacgcgcaaaccatcgacgccctggccggtgagttcagcgag
cgtttcatgctgcactacaacatgccgccgttcgccacgggcgaaaccggccgcgtgggc
tcgcccaagcgccgcgaaatcggccacggtcgcctggccaagcgcgccctggtgccggtg
ctgcccgccaaggaagacttcccgtacaccatccgcgtggtgtcggaaatcaccgaatcg
aacggttcgtcgtcgatggcatcggtgtgcggtggctgcctctccatgctggacgctggc
gtgccgctgaaggcgcatgtcgctggcatcgccatgggtctgatcaaggaaggcaaccgt
tttgcggtgctgaccgacatcctgggcgacgaagatcacctgggcgacatggacttcaag
gtggctggcaccacgcaaggcgtgaccgcgctgcaaatggacatcaagatccagggcatc
accaaggaaatcatgcaagtcgcactggcgcaagccaaagaagcgcgcatgcacatcctg
ggcatcatggtgggggccgtgggcggcgccaaggacgaggtgtccgagttcgccccgcgt
ctgtacaccatgaagatcaaccccgagaagatccgtgacgtgatcggtaagggcggcgcc
accatccgcgccctgaccgaagaaaccggcacccagatcaacatcgcggaagacggcacc
atcaccatcgcctcgaccgaagcggccaaggccgaagcggccaagaagcgcatcgagcaa
atcaccgctgaagccgaaatcggcaaggtgtacgaaggcccggtcgtcaagattctggac
ttcggcgccctggtcaacgtgctgcctggcaaagatggtctgctgcacatcagccaaatt
gcccaccagcgcgtggaaaaggtgacggacttcctgaccgaaggccagatcgtcaaggtc
aaagtgctggaaacggacgaaaaaggccgtatcaagctgtccatgaaggctttgttggag
cgtccggaaggcatggaagaggagcgtttcgagcgttctcgccgtgaagaccggggtgat
cgttttgaccgtggcgatcgtcgtgatcgcggcccgcgtcgtgagcgtgctgagcaagct
ccgcgtacggaagcggctgcccccgcagaacccgctgctgacgcgccgcaacaacaacag
cagcaacagcagtaa
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