Vitreoscilla filiformis: VITFI_CDS1972
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Entry
VITFI_CDS1972 CDS
T04960
Name
(GenBank) (aspartate(89)-C(3))-methylthiotransferase ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vff03009
]
VITFI_CDS1972
Enzymes [BR:
vff01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
VITFI_CDS1972
Ribosome biogenesis [BR:
vff03009
]
Prokaryotic type
ribosomal protein modification factors
VITFI_CDS1972
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
ASM77750
UniProt:
A0A221KG08
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Position
2049049..2050470
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AA seq
473 aa
AA seq
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MRHSGAFATIAPMTHASASGAPSAPTIGFVSLGCPKALTDSELILTQLSAEGYRTSKTYA
GADLVIVNTCGFIDDAVKESLDAIGEALTENGKVIVTGCLGARQAEGGENMVRQVHPKVL
AVTGPHATQEVMDAVHAHVPKPHDPFVDLVPAAGIKLTPKHYAYLKISEGCNHRCTFCII
PSLRGDLVSRPVGDVLNEAKALFESGVKELLVVSQDTSAYGVDVKYRTGFWNGAPVKTRM
LDLVAKLGELARAHGAWVRLHYVYPYPHVDEVIPLMAEGLVLPYLDVPFQHAHPDVLKRM
KRPASGERNLERIQRWRELCPELIVRSTFIAGFPGETEDEFSYLLDFLKEAQIDRAGCFA
YSPVDGALANELPGALPDAVREERRARFMAVAEAVSVARLQRRVGATMQVLVDSAPALGR
KGGIGRSYADAPEIDGLVRLLPPTKASTQMRVGEFVKARIVAADGHDLIAQPI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccacagcggggcgtttgcgacaatcgcccccatgacccacgcttctgcttctggc
gccccgtccgcgcccaccatcggttttgtgagcctcggctgcccgaaggccctgaccgat
tccgaactcatcctcacccagctctcggctgagggctaccgcaccagcaagacctacgcc
ggcgccgatttggtgatcgtcaacacctgcggtttcatcgacgatgcggtcaaggaaagc
ctggacgccatcggcgaagccttgaccgaaaacggcaaggtgatcgtcaccggctgcctg
ggggcgcgtcaggccgaaggcggcgaaaacatggtgcgtcaagttcaccccaaagtgctg
gcggtcacggggccgcacgccacgcaagaggtgatggacgccgtccacgcccatgtgccc
aagccgcacgacccctttgtcgatttggtgcctgccgccggcatcaaactcacgcccaag
cattacgcctacctcaagatcagcgagggctgtaaccatcgctgcaccttctgcatcatc
ccgagtttgcggggggatttggtgtcgcgtccggtgggtgatgtgctgaacgaagccaag
gcgctgttcgaaagcggcgtcaaagaactgctggtggtgagccaagacacctcggcctac
ggcgtggatgtgaagtaccgcaccggtttctggaacggagccccggtcaaaacgcgcatg
ctcgatttggtggccaagctgggtgaactggcacgggcgcatggtgcttgggtgcgcttg
cactatgtctacccttacccgcacgtcgatgaagtgattccgctcatggccgaagggttg
gtgttgccttacctcgacgtgccgttccagcacgcccaccccgatgtgctcaagcgcatg
aaacggcccgccagcggtgaacgcaacttagagcgcatccaacgctggcgcgagctgtgc
cccgagttgatcgtgcgttccaccttcatcgccggtttccccggtgaaacggaggatgaa
ttcagctatttgctggattttctgaaagaggcccaaatcgaccgggcaggctgtttcgct
tactctcccgtggacggcgcgttggccaacgagctgcccggcgctttgcccgacgcggtg
cgcgaggagcgccgcgcccgcttcatggcggtggccgaagcggtgtcggtggcgcggctc
cagcgccgtgtgggggccaccatgcaagttttggtggacagtgcccccgccctgggccgc
aaaggtggtattggccgcagctacgccgatgcccccgagatcgatggcctggtgcgcttg
ctgccgccgaccaaagcctctacgcagatgcgggtgggtgagttcgtcaaggcgcgcatc
gtagcggcagatggccacgatttgatcgcccaaccgatctga
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